Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:67158803-67538962

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Jmjd1c 10 67096327 to 67256326 159999 + protein coding gene jumonji domain containing 1C
A630074N13Rik 10 67177782 to 67183949 6167 unclassified gene RIKEN cDNA A630074N13 gene
Tssr93808 10 67177799 to 67177807 8 + TSS region transcription start site region 93808
Tssr93809 10 67184637 to 67184680 43 + TSS region transcription start site region 93809
Tssr97945 10 67185570 to 67185581 11 - TSS region transcription start site region 97945
Tssr93810 10 67185680 to 67185697 17 + TSS region transcription start site region 93810
Tssr93811 10 67185703 to 67185723 20 + TSS region transcription start site region 93811
Cpgi1664 10 67185712 to 67185913 201 CpG island CpG island 1664
Tssr93812 10 67185730 to 67185768 38 + TSS region transcription start site region 93812
Tssr3227 10 67185773 to 67185776 3 + TSS region transcription start site region 3227
Tssr93813 10 67185941 to 67185955 14 + TSS region transcription start site region 93813
Tssr93814 10 67186020 to 67186040 20 + TSS region transcription start site region 93814
Tssr93815 10 67186073 to 67186100 27 + TSS region transcription start site region 93815
Tssr93816 10 67189272 to 67189286 14 + TSS region transcription start site region 93816
Tssr93817 10 67193548 to 67193553 5 + TSS region transcription start site region 93817
Cpgi1665 10 67205271 to 67205442 171 CpG island CpG island 1665
Tssr93818 10 67215298 to 67215310 12 + TSS region transcription start site region 93818
Tssr93819 10 67219409 to 67219422 13 + TSS region transcription start site region 93819
Tssr93820 10 67220109 to 67220123 14 + TSS region transcription start site region 93820
Tssr93821 10 67224851 to 67224870 19 + TSS region transcription start site region 93821
Tssr93822 10 67224969 to 67224994 25 + TSS region transcription start site region 93822
Tssr93823 10 67229998 to 67230024 26 + TSS region transcription start site region 93823
Gm26359 10 67235861 to 67235961 100 - snRNA gene predicted gene, 26359
Tssr93824 10 67254645 to 67254650 5 + TSS region transcription start site region 93824
Nrbf2 10 67266689 to 67285305 18616 - protein coding gene nuclear receptor binding factor 2
Cpgi1666 10 67284601 to 67285803 1202 CpG island CpG island 1666
Tssr97946 10 67285248 to 67285316 68 - TSS region transcription start site region 97946
Gm46200 10 67285433 to 67293160 7727 + lncRNA gene predicted gene, 46200
Tssr93825 10 67285449 to 67285470 21 + TSS region transcription start site region 93825
Tssr93826 10 67285475 to 67285513 38 + TSS region transcription start site region 93826
Tssr93827 10 67285537 to 67285551 14 + TSS region transcription start site region 93827
Gm49454 10 67297406 to 67418927 121521 + lincRNA gene predicted gene, 49454
Gm46229 10 67304402 to 67313629 9227 + lncRNA gene predicted gene, 46229
Gm47516 10 67348803 to 67348962 159 - pseudogene predicted gene, 47516
Gm46230 10 67349979 to 67397213 47234 + lncRNA gene predicted gene, 46230
Gm31962 10 67399678 to 67419288 19610 + lncRNA gene predicted gene, 31962
Gm32023 10 67423994 to 67425251 1257 + lincRNA gene predicted gene, 32023
Gm47531 10 67436090 to 67443429 7339 - lincRNA gene predicted gene, 47531
Cpgi1667 10 67458729 to 67459008 279 CpG island CpG island 1667
4930403L11Rik 10 67484387 to 67486050 1663 unclassified gene RIKEN cDNA 4930403L11 gene
Gm32255 10 67496359 to 67497707 1348 - lincRNA gene predicted gene, 32255
Gm40679 10 67501139 to 67503142 2003 - lncRNA gene predicted gene, 40679
D10Mit113 10 67507710 to 67507833 123 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 113
Gm32176 10 67509125 to 67511539 2414 + lncRNA gene predicted gene, 32176
Tssr93828 10 67528369 to 67528398 29 + TSS region transcription start site region 93828
Tssr93829 10 67534512 to 67534525 13 + TSS region transcription start site region 93829
Cpgi1668 10 67535017 to 67537076 2059 CpG island CpG island 1668
Tssr97947 10 67535332 to 67535350 18 - TSS region transcription start site region 97947
Tssr93830 10 67535465 to 67535492 27 + TSS region transcription start site region 93830
Egr2 10 67535475 to 67542188 6713 + protein coding gene early growth response 2
Tssr93831 10 67535493 to 67535515 22 + TSS region transcription start site region 93831
Tssr97948 10 67535544 to 67535549 5 - TSS region transcription start site region 97948
Tssr93832 10 67535663 to 67535673 10 + TSS region transcription start site region 93832
Tssr97949 10 67536779 to 67536803 24 - TSS region transcription start site region 97949
Tssr97950 10 67537154 to 67537158 4 - TSS region transcription start site region 97950
Tssr93833 10 67537209 to 67537213 4 + TSS region transcription start site region 93833
Tssr97951 10 67537385 to 67537396 11 - TSS region transcription start site region 97951
Cpgi1669 10 67537466 to 67537929 463 CpG island CpG island 1669
Tssr97952 10 67537699 to 67537711 12 - TSS region transcription start site region 97952
Tssr93834 10 67537861 to 67537877 16 + TSS region transcription start site region 93834
Tssr93835 10 67538063 to 67538074 11 + TSS region transcription start site region 93835
Cpgi1670 10 67538170 to 67539219 1049 CpG island CpG island 1670
Tssr93836 10 67538186 to 67538195 9 + TSS region transcription start site region 93836
Tssr93837 10 67538299 to 67538309 10 + TSS region transcription start site region 93837
Tssr93838 10 67538463 to 67538499 36 + TSS region transcription start site region 93838
Tssr93839 10 67538563 to 67538569 6 + TSS region transcription start site region 93839