Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:66850109-67590123

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156 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
nmf172 10 53772094 to 67012618 13240524 heritable phenotypic marker neuroscience mutagenesis facility, 172
nmf347 10 53772094 to 67012618 13240524 heritable phenotypic marker neuroscience mutagenesis facility, 347
Gm31416 10 66832144 to 66911559 79415 - lncRNA gene predicted gene, 31416
Tssr93791 10 66865274 to 66865294 20 + TSS region transcription start site region 93791
D10Mit61.1 10 66866670 to 66866786 116 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 61.1
D10Mit61 10 66866787 to 66866931 144 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 61
Gm47903 10 66889671 to 66891612 1941 - lincRNA gene predicted gene, 47903
Tssr97931 10 66911403 to 66911434 31 - TSS region transcription start site region 97931
Tssr97932 10 66911469 to 66911483 14 - TSS region transcription start site region 97932
1110002J07Rik 10 66912489 to 66920258 7769 - lincRNA gene RIKEN cDNA 1110002J07 gene
Cpgi1660 10 66913359 to 66913562 203 CpG island CpG island 1660
Gm26576 10 66920302 to 66923599 3297 + lincRNA gene predicted gene, 26576
Tssr97933 10 66921269 to 66921309 40 - TSS region transcription start site region 97933
Tssr97934 10 66930855 to 66930869 14 - TSS region transcription start site region 97934
Tssr93792 10 66968773 to 66968789 16 + TSS region transcription start site region 93792
Tssr93793 10 66997200 to 66997203 3 + TSS region transcription start site region 93793
Cpgi1661 10 67002763 to 67002956 193 CpG island CpG island 1661
Tssr93794 10 67002864 to 67002894 30 + TSS region transcription start site region 93794
Gm31763 10 67005075 to 67041326 36251 + antisense lncRNA gene predicted gene, 31763
Tssr93795 10 67005086 to 67005093 7 + TSS region transcription start site region 93795
Reep3 10 67009189 to 67096945 87756 - protein coding gene receptor accessory protein 3
Tssr97935 10 67011167 to 67011209 42 - TSS region transcription start site region 97935
Tssr97936 10 67011237 to 67011254 17 - TSS region transcription start site region 97936
Tssr97937 10 67011267 to 67011282 15 - TSS region transcription start site region 97937
D10Mit20 10 67012408 to 67012633 225 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 20
Lmb4 10 67012408 to 92422811 25410403 QTL lupus in MRL and B6 F2 cross, QTL 4
Skull14 10 67012408 to 67012633 225 QTL skull morphology 14
Jckm3 10 67012408 to 67012633 225 QTL juvenile cystic kidney modifier 3
Pbwg16 10 67012408 to 67012633 225 QTL postnatal body weight growth 16
D10Mit15 10 67012443 to 67012618 175 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology-15
Lifespan2 10 67012443 to 67012618 175 QTL life span 2
Hpcr2 10 67012443 to 67012618 175 QTL hepatocarcinogen resistance 2
Tssr97938 10 67013273 to 67013290 17 - TSS region transcription start site region 97938
Tssr97939 10 67037970 to 67037974 4 - TSS region transcription start site region 97939
Tssr97940 10 67069095 to 67069103 8 - TSS region transcription start site region 97940
Cpgi1662 10 67096046 to 67097548 1502 CpG island CpG island 1662
Tssr93796 10 67096324 to 67096336 12 + TSS region transcription start site region 93796
Jmjd1c 10 67096327 to 67256326 159999 + protein coding gene jumonji domain containing 1C
Tssr93797 10 67096341 to 67096361 20 + TSS region transcription start site region 93797
Tssr93798 10 67096367 to 67096378 11 + TSS region transcription start site region 93798
Tssr93799 10 67096397 to 67096406 9 + TSS region transcription start site region 93799
Tssr93800 10 67096456 to 67096534 78 + TSS region transcription start site region 93800
Tssr97941 10 67096836 to 67096866 30 - TSS region transcription start site region 97941
Tssr97942 10 67096892 to 67096901 9 - TSS region transcription start site region 97942
Tssr97943 10 67096906 to 67096923 17 - TSS region transcription start site region 97943
Tssr97944 10 67096931 to 67096959 28 - TSS region transcription start site region 97944
Tssr93801 10 67096999 to 67097025 26 + TSS region transcription start site region 93801
Tssr93802 10 67097029 to 67097050 21 + TSS region transcription start site region 93802
Tssr93803 10 67098037 to 67098040 3 + TSS region transcription start site region 93803
D10Ertd638e 10 67099749 to 67099969 220 DNA segment DNA segment, Chr 10, ERATO Doi 638, expressed
Tssr93804 10 67119499 to 67119513 14 + TSS region transcription start site region 93804
Gm46228 10 67120533 to 67124780 4247 - lncRNA gene predicted gene, 46228
Cpgi1663 10 67126454 to 67127685 1231 CpG island CpG island 1663
Tssr93805 10 67127082 to 67127102 20 + TSS region transcription start site region 93805
Tssr93806 10 67132368 to 67132372 4 + TSS region transcription start site region 93806
Tssr93807 10 67145171 to 67145173 2 + TSS region transcription start site region 93807
A630074N13Rik 10 67177782 to 67183949 6167 unclassified gene RIKEN cDNA A630074N13 gene
Tssr93808 10 67177799 to 67177807 8 + TSS region transcription start site region 93808
Tssr93809 10 67184637 to 67184680 43 + TSS region transcription start site region 93809
Tssr97945 10 67185570 to 67185581 11 - TSS region transcription start site region 97945
Tssr93810 10 67185680 to 67185697 17 + TSS region transcription start site region 93810
Tssr93811 10 67185703 to 67185723 20 + TSS region transcription start site region 93811
Cpgi1664 10 67185712 to 67185913 201 CpG island CpG island 1664
Tssr93812 10 67185730 to 67185768 38 + TSS region transcription start site region 93812
Tssr3227 10 67185773 to 67185776 3 + TSS region transcription start site region 3227
Tssr93813 10 67185941 to 67185955 14 + TSS region transcription start site region 93813
Tssr93814 10 67186020 to 67186040 20 + TSS region transcription start site region 93814
Tssr93815 10 67186073 to 67186100 27 + TSS region transcription start site region 93815
Tssr93816 10 67189272 to 67189286 14 + TSS region transcription start site region 93816
Tssr93817 10 67193548 to 67193553 5 + TSS region transcription start site region 93817
Cpgi1665 10 67205271 to 67205442 171 CpG island CpG island 1665
Tssr93818 10 67215298 to 67215310 12 + TSS region transcription start site region 93818
Tssr93819 10 67219409 to 67219422 13 + TSS region transcription start site region 93819
Tssr93820 10 67220109 to 67220123 14 + TSS region transcription start site region 93820
Tssr93821 10 67224851 to 67224870 19 + TSS region transcription start site region 93821
Tssr93822 10 67224969 to 67224994 25 + TSS region transcription start site region 93822
Tssr93823 10 67229998 to 67230024 26 + TSS region transcription start site region 93823
Gm26359 10 67235861 to 67235961 100 - snRNA gene predicted gene, 26359
Tssr93824 10 67254645 to 67254650 5 + TSS region transcription start site region 93824
Nrbf2 10 67266689 to 67285305 18616 - protein coding gene nuclear receptor binding factor 2
Cpgi1666 10 67284601 to 67285803 1202 CpG island CpG island 1666
Tssr97946 10 67285248 to 67285316 68 - TSS region transcription start site region 97946
Gm46200 10 67285433 to 67293160 7727 + lncRNA gene predicted gene, 46200
Tssr93825 10 67285449 to 67285470 21 + TSS region transcription start site region 93825
Tssr93826 10 67285475 to 67285513 38 + TSS region transcription start site region 93826
Tssr93827 10 67285537 to 67285551 14 + TSS region transcription start site region 93827
Gm49454 10 67297406 to 67418927 121521 + lincRNA gene predicted gene, 49454
Gm46229 10 67304402 to 67313629 9227 + lncRNA gene predicted gene, 46229
Gm47516 10 67348803 to 67348962 159 - pseudogene predicted gene, 47516
Gm46230 10 67349979 to 67397213 47234 + lncRNA gene predicted gene, 46230
Gm31962 10 67399678 to 67419288 19610 + lncRNA gene predicted gene, 31962
Gm32023 10 67423994 to 67425251 1257 + lincRNA gene predicted gene, 32023
Gm47531 10 67436090 to 67443429 7339 - lincRNA gene predicted gene, 47531
Cpgi1667 10 67458729 to 67459008 279 CpG island CpG island 1667
4930403L11Rik 10 67484387 to 67486050 1663 unclassified gene RIKEN cDNA 4930403L11 gene
Gm32255 10 67496359 to 67497707 1348 - lincRNA gene predicted gene, 32255
Gm40679 10 67501139 to 67503142 2003 - lncRNA gene predicted gene, 40679
D10Mit113 10 67507710 to 67507833 123 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 113
Gm32176 10 67509125 to 67511539 2414 + lncRNA gene predicted gene, 32176
Tssr93828 10 67528369 to 67528398 29 + TSS region transcription start site region 93828
Tssr93829 10 67534512 to 67534525 13 + TSS region transcription start site region 93829
Cpgi1668 10 67535017 to 67537076 2059 CpG island CpG island 1668
Tssr97947 10 67535332 to 67535350 18 - TSS region transcription start site region 97947
Tssr93830 10 67535465 to 67535492 27 + TSS region transcription start site region 93830
Egr2 10 67535475 to 67542188 6713 + protein coding gene early growth response 2
Tssr93831 10 67535493 to 67535515 22 + TSS region transcription start site region 93831
Tssr97948 10 67535544 to 67535549 5 - TSS region transcription start site region 97948
Tssr93832 10 67535663 to 67535673 10 + TSS region transcription start site region 93832
Tssr97949 10 67536779 to 67536803 24 - TSS region transcription start site region 97949
Tssr97950 10 67537154 to 67537158 4 - TSS region transcription start site region 97950
Tssr93833 10 67537209 to 67537213 4 + TSS region transcription start site region 93833
Tssr97951 10 67537385 to 67537396 11 - TSS region transcription start site region 97951
Cpgi1669 10 67537466 to 67537929 463 CpG island CpG island 1669
Tssr97952 10 67537699 to 67537711 12 - TSS region transcription start site region 97952
Tssr93834 10 67537861 to 67537877 16 + TSS region transcription start site region 93834
Tssr93835 10 67538063 to 67538074 11 + TSS region transcription start site region 93835
Cpgi1670 10 67538170 to 67539219 1049 CpG island CpG island 1670
Tssr93836 10 67538186 to 67538195 9 + TSS region transcription start site region 93836
Tssr93837 10 67538299 to 67538309 10 + TSS region transcription start site region 93837
Tssr93838 10 67538463 to 67538499 36 + TSS region transcription start site region 93838
Tssr93839 10 67538563 to 67538569 6 + TSS region transcription start site region 93839
Tssr97953 10 67539162 to 67539172 10 - TSS region transcription start site region 97953
Tssr93840 10 67539250 to 67539263 13 + TSS region transcription start site region 93840
Tssr93841 10 67539798 to 67539809 11 + TSS region transcription start site region 93841
Tssr93842 10 67539853 to 67539878 25 + TSS region transcription start site region 93842
Tssr93843 10 67539938 to 67539952 14 + TSS region transcription start site region 93843
Tssr93844 10 67539974 to 67540001 27 + TSS region transcription start site region 93844
Tssr93845 10 67540016 to 67540041 25 + TSS region transcription start site region 93845
Tssr93846 10 67540047 to 67540089 42 + TSS region transcription start site region 93846
Tssr97954 10 67540137 to 67540173 36 - TSS region transcription start site region 97954
Tssr93847 10 67540747 to 67540751 4 + TSS region transcription start site region 93847
Ado 10 67544511 to 67548955 4444 - protein coding gene 2-aminoethanethiol (cysteamine) dioxygenase
Tssr97955 10 67547493 to 67547499 6 - TSS region transcription start site region 97955
Tssr97956 10 67547768 to 67547796 28 - TSS region transcription start site region 97956
Cpgi1671 10 67547788 to 67549704 1916 CpG island CpG island 1671
Tssr93848 10 67547822 to 67547838 16 + TSS region transcription start site region 93848
Tssr93849 10 67547865 to 67547885 20 + TSS region transcription start site region 93849
Tssr93850 10 67547939 to 67547959 20 + TSS region transcription start site region 93850
Tssr93851 10 67547960 to 67547985 25 + TSS region transcription start site region 93851
Tssr93852 10 67548225 to 67548236 11 + TSS region transcription start site region 93852
Tssr97957 10 67548742 to 67548793 51 - TSS region transcription start site region 97957
Tssr97958 10 67548944 to 67549001 57 - TSS region transcription start site region 97958
Tssr3228 10 67549010 to 67549022 12 - TSS region transcription start site region 3228
Tssr97959 10 67549036 to 67549047 11 - TSS region transcription start site region 97959
Tssr97960 10 67549077 to 67549094 17 - TSS region transcription start site region 97960
Tssr97961 10 67549101 to 67549149 48 - TSS region transcription start site region 97961
Tssr93853 10 67554576 to 67554581 5 + TSS region transcription start site region 93853
4930563J15Rik 10 67568522 to 67571989 3467 - lincRNA gene RIKEN cDNA 4930563J15 gene
Tssr97962 10 67570003 to 67570052 49 - TSS region transcription start site region 97962
Tssr97963 10 67571938 to 67571944 6 - TSS region transcription start site region 97963
Tssr97964 10 67571946 to 67571969 23 - TSS region transcription start site region 97964
Tssr97965 10 67571980 to 67571989 9 - TSS region transcription start site region 97965
Gm10797 10 67572042 to 67574263 2221 + protein coding gene predicted gene 10797
Tssr93854 10 67572060 to 67572076 16 + TSS region transcription start site region 93854
Gm32364 10 67575883 to 67586387 10504 + lincRNA gene predicted gene, 32364
Tssr97966 10 67585962 to 67585969 7 - TSS region transcription start site region 97966