Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:66736341-67456361

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101 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
nmf347 10 53772094 to 67012618 13240524 heritable phenotypic marker neuroscience mutagenesis facility, 347
nmf172 10 53772094 to 67012618 13240524 heritable phenotypic marker neuroscience mutagenesis facility, 172
Gm18777 10 66740286 to 66741135 849 - pseudogene predicted gene, 18777
Gm31240 10 66740926 to 66745585 4659 - lncRNA gene predicted gene, 31240
Gm47895 10 66759454 to 66762095 2641 + lincRNA gene predicted gene, 47895
Cpgi1659 10 66772875 to 66773092 217 CpG island CpG island 1659
Gm40678 10 66803950 to 66829667 25717 - lncRNA gene predicted gene, 40678
Gm47896 10 66809840 to 66822354 12514 + lincRNA gene predicted gene, 47896
Gm47897 10 66824169 to 66827403 3234 + lincRNA gene predicted gene, 47897
Gm31416 10 66832144 to 66911559 79415 - lncRNA gene predicted gene, 31416
Gm47900 10 66837597 to 66839501 1904 + lincRNA gene predicted gene, 47900
Tssr93791 10 66865274 to 66865294 20 + TSS region transcription start site region 93791
D10Mit61.1 10 66866670 to 66866786 116 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 61.1
D10Mit61 10 66866787 to 66866931 144 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 61
Gm47903 10 66889671 to 66891612 1941 - lincRNA gene predicted gene, 47903
Tssr97931 10 66911403 to 66911434 31 - TSS region transcription start site region 97931
Tssr97932 10 66911469 to 66911483 14 - TSS region transcription start site region 97932
1110002J07Rik 10 66912489 to 66920258 7769 - lincRNA gene RIKEN cDNA 1110002J07 gene
Cpgi1660 10 66913359 to 66913562 203 CpG island CpG island 1660
Gm26576 10 66920302 to 66923599 3297 + lincRNA gene predicted gene, 26576
Tssr97933 10 66921269 to 66921309 40 - TSS region transcription start site region 97933
Tssr97934 10 66930855 to 66930869 14 - TSS region transcription start site region 97934
Tssr93792 10 66968773 to 66968789 16 + TSS region transcription start site region 93792
Tssr93793 10 66997200 to 66997203 3 + TSS region transcription start site region 93793
Cpgi1661 10 67002763 to 67002956 193 CpG island CpG island 1661
Tssr93794 10 67002864 to 67002894 30 + TSS region transcription start site region 93794
Gm31763 10 67005075 to 67041326 36251 + antisense lncRNA gene predicted gene, 31763
Tssr93795 10 67005086 to 67005093 7 + TSS region transcription start site region 93795
Reep3 10 67009189 to 67096945 87756 - protein coding gene receptor accessory protein 3
Tssr97935 10 67011167 to 67011209 42 - TSS region transcription start site region 97935
Tssr97936 10 67011237 to 67011254 17 - TSS region transcription start site region 97936
Tssr97937 10 67011267 to 67011282 15 - TSS region transcription start site region 97937
Jckm3 10 67012408 to 67012633 225 QTL juvenile cystic kidney modifier 3
Pbwg16 10 67012408 to 67012633 225 QTL postnatal body weight growth 16
Skull14 10 67012408 to 67012633 225 QTL skull morphology 14
D10Mit20 10 67012408 to 67012633 225 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 20
Lmb4 10 67012408 to 92422811 25410403 QTL lupus in MRL and B6 F2 cross, QTL 4
D10Mit15 10 67012443 to 67012618 175 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology-15
Lifespan2 10 67012443 to 67012618 175 QTL life span 2
Hpcr2 10 67012443 to 67012618 175 QTL hepatocarcinogen resistance 2
Tssr97938 10 67013273 to 67013290 17 - TSS region transcription start site region 97938
Tssr97939 10 67037970 to 67037974 4 - TSS region transcription start site region 97939
Tssr97940 10 67069095 to 67069103 8 - TSS region transcription start site region 97940
Cpgi1662 10 67096046 to 67097548 1502 CpG island CpG island 1662
Tssr93796 10 67096324 to 67096336 12 + TSS region transcription start site region 93796
Jmjd1c 10 67096327 to 67256326 159999 + protein coding gene jumonji domain containing 1C
Tssr93797 10 67096341 to 67096361 20 + TSS region transcription start site region 93797
Tssr93798 10 67096367 to 67096378 11 + TSS region transcription start site region 93798
Tssr93799 10 67096397 to 67096406 9 + TSS region transcription start site region 93799
Tssr93800 10 67096456 to 67096534 78 + TSS region transcription start site region 93800
Tssr97941 10 67096836 to 67096866 30 - TSS region transcription start site region 97941
Tssr97942 10 67096892 to 67096901 9 - TSS region transcription start site region 97942
Tssr97943 10 67096906 to 67096923 17 - TSS region transcription start site region 97943
Tssr97944 10 67096931 to 67096959 28 - TSS region transcription start site region 97944
Tssr93801 10 67096999 to 67097025 26 + TSS region transcription start site region 93801
Tssr93802 10 67097029 to 67097050 21 + TSS region transcription start site region 93802
Tssr93803 10 67098037 to 67098040 3 + TSS region transcription start site region 93803
D10Ertd638e 10 67099749 to 67099969 220 DNA segment DNA segment, Chr 10, ERATO Doi 638, expressed
Tssr93804 10 67119499 to 67119513 14 + TSS region transcription start site region 93804
Gm46228 10 67120533 to 67124780 4247 - lncRNA gene predicted gene, 46228
Cpgi1663 10 67126454 to 67127685 1231 CpG island CpG island 1663
Tssr93805 10 67127082 to 67127102 20 + TSS region transcription start site region 93805
Tssr93806 10 67132368 to 67132372 4 + TSS region transcription start site region 93806
Tssr93807 10 67145171 to 67145173 2 + TSS region transcription start site region 93807
A630074N13Rik 10 67177782 to 67183949 6167 unclassified gene RIKEN cDNA A630074N13 gene
Tssr93808 10 67177799 to 67177807 8 + TSS region transcription start site region 93808
Tssr93809 10 67184637 to 67184680 43 + TSS region transcription start site region 93809
Tssr97945 10 67185570 to 67185581 11 - TSS region transcription start site region 97945
Tssr93810 10 67185680 to 67185697 17 + TSS region transcription start site region 93810
Tssr93811 10 67185703 to 67185723 20 + TSS region transcription start site region 93811
Cpgi1664 10 67185712 to 67185913 201 CpG island CpG island 1664
Tssr93812 10 67185730 to 67185768 38 + TSS region transcription start site region 93812
Tssr3227 10 67185773 to 67185776 3 + TSS region transcription start site region 3227
Tssr93813 10 67185941 to 67185955 14 + TSS region transcription start site region 93813
Tssr93814 10 67186020 to 67186040 20 + TSS region transcription start site region 93814
Tssr93815 10 67186073 to 67186100 27 + TSS region transcription start site region 93815
Tssr93816 10 67189272 to 67189286 14 + TSS region transcription start site region 93816
Tssr93817 10 67193548 to 67193553 5 + TSS region transcription start site region 93817
Cpgi1665 10 67205271 to 67205442 171 CpG island CpG island 1665
Tssr93818 10 67215298 to 67215310 12 + TSS region transcription start site region 93818
Tssr93819 10 67219409 to 67219422 13 + TSS region transcription start site region 93819
Tssr93820 10 67220109 to 67220123 14 + TSS region transcription start site region 93820
Tssr93821 10 67224851 to 67224870 19 + TSS region transcription start site region 93821
Tssr93822 10 67224969 to 67224994 25 + TSS region transcription start site region 93822
Tssr93823 10 67229998 to 67230024 26 + TSS region transcription start site region 93823
Gm26359 10 67235861 to 67235961 100 - snRNA gene predicted gene, 26359
Tssr93824 10 67254645 to 67254650 5 + TSS region transcription start site region 93824
Nrbf2 10 67266689 to 67285305 18616 - protein coding gene nuclear receptor binding factor 2
Cpgi1666 10 67284601 to 67285803 1202 CpG island CpG island 1666
Tssr97946 10 67285248 to 67285316 68 - TSS region transcription start site region 97946
Gm46200 10 67285433 to 67293160 7727 + lncRNA gene predicted gene, 46200
Tssr93825 10 67285449 to 67285470 21 + TSS region transcription start site region 93825
Tssr93826 10 67285475 to 67285513 38 + TSS region transcription start site region 93826
Tssr93827 10 67285537 to 67285551 14 + TSS region transcription start site region 93827
Gm49454 10 67297406 to 67418927 121521 + lincRNA gene predicted gene, 49454
Gm46229 10 67304402 to 67313629 9227 + lncRNA gene predicted gene, 46229
Gm47516 10 67348803 to 67348962 159 - pseudogene predicted gene, 47516
Gm46230 10 67349979 to 67397213 47234 + lncRNA gene predicted gene, 46230
Gm31962 10 67399678 to 67419288 19610 + lncRNA gene predicted gene, 31962
Gm32023 10 67423994 to 67425251 1257 + lincRNA gene predicted gene, 32023
Gm47531 10 67436090 to 67443429 7339 - lincRNA gene predicted gene, 47531