Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:65225401-67115506

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89 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
nmf172 10 53772094 to 67012618 13240524 heritable phenotypic marker neuroscience mutagenesis facility, 172
nmf347 10 53772094 to 67012618 13240524 heritable phenotypic marker neuroscience mutagenesis facility, 347
Gm7540 10 65416853 to 65417672 819 + pseudogene predicted gene 7540
D10Mit111 10 65444141 to 65444339 198 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 111
D10Mit240 10 65475132 to 65475301 169 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 240
Gm4796 10 65534654 to 65535277 623 + pseudogene predicted gene 4796
Tssr93786 10 65643851 to 65643857 6 + TSS region transcription start site region 93786
Marcksl1-ps1 10 65767877 to 65768569 692 + pseudogene MARCKS-like 1, pseudogene 1
Gm19116 10 65771558 to 65772199 641 - pseudogene predicted gene, 19116
Gm30853 10 65875663 to 65908250 32587 - lincRNA gene predicted gene, 30853
Tssr97926 10 65908227 to 65908258 31 - TSS region transcription start site region 97926
1700023F02Rik 10 66120609 to 66124064 3455 - lincRNA gene RIKEN cDNA 1700023F02 gene
Tssr97927 10 66124058 to 66124069 11 - TSS region transcription start site region 97927
4930407I19Rik 10 66145296 to 66179514 34218 + lincRNA gene RIKEN cDNA 4930407I19 gene
Gm31056 10 66163757 to 66200465 36708 - lncRNA gene predicted gene, 31056
Gm22829 10 66170401 to 66170506 105 - snRNA gene predicted gene, 22829
Tssr3226 10 66200487 to 66200492 5 - TSS region transcription start site region 3226
Gm18509 10 66253811 to 66254727 916 - pseudogene predicted gene, 18509
Gm40677 10 66293284 to 66512512 219228 - lncRNA gene predicted gene, 40677
Gm22594 10 66483553 to 66483682 129 + snoRNA gene predicted gene, 22594
D10Mit130 10 66502233 to 66502378 145 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 130
Bbaa18 10 66502233 to 66502378 145 QTL B.burgdorferi-associated arthritis 18
D10Mit299 10 66567361 to 66567546 185 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 299
Gm28139 10 66640918 to 66641862 944 + lincRNA gene predicted gene 28139
Gm47894 10 66691342 to 66691615 273 - pseudogene predicted gene, 47894
Tssr97928 10 66698087 to 66698096 9 - TSS region transcription start site region 97928
Tssr97929 10 66698098 to 66698148 50 - TSS region transcription start site region 97929
Tssr97930 10 66698151 to 66698167 16 - TSS region transcription start site region 97930
Tssr93787 10 66698210 to 66698217 7 + TSS region transcription start site region 93787
Tssr93788 10 66698238 to 66698247 9 + TSS region transcription start site region 93788
Gm31181 10 66698241 to 66705961 7720 + lincRNA gene predicted gene, 31181
Tssr93789 10 66698256 to 66698265 9 + TSS region transcription start site region 93789
Tssr93790 10 66698279 to 66698298 19 + TSS region transcription start site region 93790
Gm18777 10 66740286 to 66741135 849 - pseudogene predicted gene, 18777
Gm31240 10 66740926 to 66745585 4659 - lncRNA gene predicted gene, 31240
Gm47895 10 66759454 to 66762095 2641 + lincRNA gene predicted gene, 47895
Cpgi1659 10 66772875 to 66773092 217 CpG island CpG island 1659
Gm40678 10 66803950 to 66829667 25717 - lncRNA gene predicted gene, 40678
Gm47896 10 66809840 to 66822354 12514 + lincRNA gene predicted gene, 47896
Gm47897 10 66824169 to 66827403 3234 + lincRNA gene predicted gene, 47897
Gm31416 10 66832144 to 66911559 79415 - lncRNA gene predicted gene, 31416
Gm47900 10 66837597 to 66839501 1904 + lincRNA gene predicted gene, 47900
Tssr93791 10 66865274 to 66865294 20 + TSS region transcription start site region 93791
D10Mit61.1 10 66866670 to 66866786 116 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 61.1
D10Mit61 10 66866787 to 66866931 144 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 61
Gm47903 10 66889671 to 66891612 1941 - lincRNA gene predicted gene, 47903
Tssr97931 10 66911403 to 66911434 31 - TSS region transcription start site region 97931
Tssr97932 10 66911469 to 66911483 14 - TSS region transcription start site region 97932
1110002J07Rik 10 66912489 to 66920258 7769 - lincRNA gene RIKEN cDNA 1110002J07 gene
Cpgi1660 10 66913359 to 66913562 203 CpG island CpG island 1660
Gm26576 10 66920302 to 66923599 3297 + lincRNA gene predicted gene, 26576
Tssr97933 10 66921269 to 66921309 40 - TSS region transcription start site region 97933
Tssr97934 10 66930855 to 66930869 14 - TSS region transcription start site region 97934
Tssr93792 10 66968773 to 66968789 16 + TSS region transcription start site region 93792
Tssr93793 10 66997200 to 66997203 3 + TSS region transcription start site region 93793
Cpgi1661 10 67002763 to 67002956 193 CpG island CpG island 1661
Tssr93794 10 67002864 to 67002894 30 + TSS region transcription start site region 93794
Gm31763 10 67005075 to 67041326 36251 + antisense lncRNA gene predicted gene, 31763
Tssr93795 10 67005086 to 67005093 7 + TSS region transcription start site region 93795
Reep3 10 67009189 to 67096945 87756 - protein coding gene receptor accessory protein 3
Tssr97935 10 67011167 to 67011209 42 - TSS region transcription start site region 97935
Tssr97936 10 67011237 to 67011254 17 - TSS region transcription start site region 97936
Tssr97937 10 67011267 to 67011282 15 - TSS region transcription start site region 97937
D10Mit20 10 67012408 to 67012633 225 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 20
Jckm3 10 67012408 to 67012633 225 QTL juvenile cystic kidney modifier 3
Skull14 10 67012408 to 67012633 225 QTL skull morphology 14
Pbwg16 10 67012408 to 67012633 225 QTL postnatal body weight growth 16
Lmb4 10 67012408 to 92422811 25410403 QTL lupus in MRL and B6 F2 cross, QTL 4
D10Mit15 10 67012443 to 67012618 175 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology-15
Hpcr2 10 67012443 to 67012618 175 QTL hepatocarcinogen resistance 2
Lifespan2 10 67012443 to 67012618 175 QTL life span 2
Tssr97938 10 67013273 to 67013290 17 - TSS region transcription start site region 97938
Tssr97939 10 67037970 to 67037974 4 - TSS region transcription start site region 97939
Tssr97940 10 67069095 to 67069103 8 - TSS region transcription start site region 97940
Cpgi1662 10 67096046 to 67097548 1502 CpG island CpG island 1662
Tssr93796 10 67096324 to 67096336 12 + TSS region transcription start site region 93796
Jmjd1c 10 67096327 to 67256326 159999 + protein coding gene jumonji domain containing 1C
Tssr93797 10 67096341 to 67096361 20 + TSS region transcription start site region 93797
Tssr93798 10 67096367 to 67096378 11 + TSS region transcription start site region 93798
Tssr93799 10 67096397 to 67096406 9 + TSS region transcription start site region 93799
Tssr93800 10 67096456 to 67096534 78 + TSS region transcription start site region 93800
Tssr97941 10 67096836 to 67096866 30 - TSS region transcription start site region 97941
Tssr97942 10 67096892 to 67096901 9 - TSS region transcription start site region 97942
Tssr97943 10 67096906 to 67096923 17 - TSS region transcription start site region 97943
Tssr97944 10 67096931 to 67096959 28 - TSS region transcription start site region 97944
Tssr93801 10 67096999 to 67097025 26 + TSS region transcription start site region 93801
Tssr93802 10 67097029 to 67097050 21 + TSS region transcription start site region 93802
Tssr93803 10 67098037 to 67098040 3 + TSS region transcription start site region 93803
D10Ertd638e 10 67099749 to 67099969 220 DNA segment DNA segment, Chr 10, ERATO Doi 638, expressed