Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:64812877-66723569

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ctnna3 10 63430098 to 65003667 1573569 + protein coding gene catenin (cadherin associated protein), alpha 3
D10Mit220 10 64914351 to 64914473 122 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 220
D10Mit129 10 64999479 to 64999567 88 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 129
Gm28881 10 65119526 to 65120367 841 - lincRNA gene predicted gene 28881
D10Mit185 10 65120455 to 65120603 148 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 185
Gm7540 10 65416853 to 65417672 819 + pseudogene predicted gene 7540
D10Mit111 10 65444141 to 65444339 198 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 111
D10Mit240 10 65475132 to 65475301 169 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 240
Gm4796 10 65534654 to 65535277 623 + pseudogene predicted gene 4796
Tssr93786 10 65643851 to 65643857 6 + TSS region transcription start site region 93786
Marcksl1-ps1 10 65767877 to 65768569 692 + pseudogene MARCKS-like 1, pseudogene 1
Gm19116 10 65771558 to 65772199 641 - pseudogene predicted gene, 19116
Gm30853 10 65875663 to 65908250 32587 - lincRNA gene predicted gene, 30853
Tssr97926 10 65908227 to 65908258 31 - TSS region transcription start site region 97926
1700023F02Rik 10 66120609 to 66124064 3455 - lincRNA gene RIKEN cDNA 1700023F02 gene
Tssr97927 10 66124058 to 66124069 11 - TSS region transcription start site region 97927
4930407I19Rik 10 66145296 to 66179514 34218 + lincRNA gene RIKEN cDNA 4930407I19 gene
Gm31056 10 66163757 to 66200465 36708 - lncRNA gene predicted gene, 31056
Gm22829 10 66170401 to 66170506 105 - snRNA gene predicted gene, 22829
Tssr3226 10 66200487 to 66200492 5 - TSS region transcription start site region 3226
Gm18509 10 66253811 to 66254727 916 - pseudogene predicted gene, 18509
Gm40677 10 66293284 to 66512512 219228 - lncRNA gene predicted gene, 40677
Gm22594 10 66483553 to 66483682 129 + snoRNA gene predicted gene, 22594
D10Mit130 10 66502233 to 66502378 145 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 130
Bbaa18 10 66502233 to 66502378 145 QTL B.burgdorferi-associated arthritis 18
D10Mit299 10 66567361 to 66567546 185 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 299
Gm28139 10 66640918 to 66641862 944 + lincRNA gene predicted gene 28139
Gm47894 10 66691342 to 66691615 273 - pseudogene predicted gene, 47894
Tssr97928 10 66698087 to 66698096 9 - TSS region transcription start site region 97928
Tssr97929 10 66698098 to 66698148 50 - TSS region transcription start site region 97929
Tssr97930 10 66698151 to 66698167 16 - TSS region transcription start site region 97930
Tssr93787 10 66698210 to 66698217 7 + TSS region transcription start site region 93787
Tssr93788 10 66698238 to 66698247 9 + TSS region transcription start site region 93788
Gm31181 10 66698241 to 66705961 7720 + lincRNA gene predicted gene, 31181
Tssr93789 10 66698256 to 66698265 9 + TSS region transcription start site region 93789
Tssr93790 10 66698279 to 66698298 19 + TSS region transcription start site region 93790