Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:63654866-64197434

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr93771 10 63655188 to 63655194 6 + TSS region transcription start site region 93771
Tssr93772 10 63683307 to 63683310 3 + TSS region transcription start site region 93772
Tssr93773 10 63800869 to 63800875 6 + TSS region transcription start site region 93773
1700020K04Rik 10 63800870 to 63801352 482 unclassified gene RIKEN cDNA 1700020K04 gene
Gm30644 10 63813718 to 63818224 4506 - lncRNA gene predicted gene, 30644
Tssr93774 10 63821043 to 63821057 14 + TSS region transcription start site region 93774
Tssr93775 10 63858850 to 63858854 4 + TSS region transcription start site region 93775
Tssr93776 10 63859130 to 63859135 5 + TSS region transcription start site region 93776
Cpgi1657 10 63886789 to 63887009 220 CpG island CpG island 1657
Tssr93777 10 63906907 to 63906918 11 + TSS region transcription start site region 93777
B230219N15Rik 10 63910022 to 63915662 5640 unclassified gene RIKEN cDNA B230219N15 gene
Gm10118 10 63924866 to 63927434 2568 - protein coding gene predicted gene 10118
Lrrtm3 10 63928497 to 64090255 161758 - protein coding gene leucine rich repeat transmembrane neuronal 3
Tssr93778 10 63951593 to 63951595 2 + TSS region transcription start site region 93778
Tssr93779 10 63986369 to 63986372 3 + TSS region transcription start site region 93779
Tssr3224 10 63988061 to 63988067 6 + TSS region transcription start site region 3224
Tssr3225 10 63998161 to 63998162 1 + TSS region transcription start site region 3225
Tssr93780 10 64017768 to 64017772 4 + TSS region transcription start site region 93780
Tssr97918 10 64037902 to 64037934 32 - TSS region transcription start site region 97918
5830490A04Rik 10 64043579 to 64044909 1330 unclassified gene RIKEN cDNA 5830490A04 gene
Tssr93781 10 64055036 to 64055045 9 + TSS region transcription start site region 93781
Tssr97919 10 64055747 to 64055758 11 - TSS region transcription start site region 97919
4931432P07Rik 10 64068985 to 64072897 3912 unclassified gene RIKEN cDNA 4931432P07 gene
Tssr97920 10 64072877 to 64072898 21 - TSS region transcription start site region 97920
Cpgi1658 10 64087846 to 64088330 484 CpG island CpG island 1658
Tssr97921 10 64090178 to 64090192 14 - TSS region transcription start site region 97921
Tssr97922 10 64090193 to 64090210 17 - TSS region transcription start site region 97922
Tssr97923 10 64090241 to 64090262 21 - TSS region transcription start site region 97923
Tssr97924 10 64090265 to 64090297 32 - TSS region transcription start site region 97924
Tssr97925 10 64090298 to 64090309 11 - TSS region transcription start site region 97925
Tssr93782 10 64090923 to 64090928 5 + TSS region transcription start site region 93782