MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 10:63400321-63560348

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Dnajc12	10	63382443 to 63408840	26397	+	protein coding gene	DnaJ heat shock protein family (Hsp40) member C12
Cpgi1652	10	63412898 to 63413060	162		CpG island	CpG island 1652
Gm7530	10	63412999 to 63413603	604	+	pseudogene	predicted gene 7530
Tssr93761	10	63416365 to 63416366	1	+	TSS region	transcription start site region 93761
Gm7075	10	63421365 to 63421789	424	-	pseudogene	predicted gene 7075
Cpgi1653	10	63421658 to 63421811	153		CpG island	CpG island 1653
Tssr97917	10	63429435 to 63429437	2	-	TSS region	transcription start site region 97917
Cpgi1654	10	63429459 to 63430299	840		CpG island	CpG island 1654
n-TStga3	10	63429476 to 63429557	81	-	tRNA gene	nuclear encoded tRNA serine 3 (anticodon TGA)
Tssr93762	10	63430061 to 63430085	24	+	TSS region	transcription start site region 93762
Tssr93763	10	63430092 to 63430105	13	+	TSS region	transcription start site region 93763
Ctnna3	10	63430098 to 65003667	1573569	+	protein coding gene	catenin (cadherin associated protein), alpha 3
Tssr93764	10	63457505 to 63457539	34	+	TSS region	transcription start site region 93764
Tssr93765	10	63457549 to 63457555	6	+	TSS region	transcription start site region 93765
Tssr93766	10	63457578 to 63457583	5	+	TSS region	transcription start site region 93766
Tssr93767	10	63480294 to 63480308	14	+	TSS region	transcription start site region 93767
Tssr93768	10	63480321 to 63480348	27	+	TSS region	transcription start site region 93768
Tssr93769	10	63528384 to 63528387	3	+	TSS region	transcription start site region 93769