Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:63119002-63369013

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mypn 10 63115795 to 63203952 88157 - protein coding gene myopalladin
Cpgi1645 10 63130896 to 63131166 270 CpG island CpG island 1645
Tssr93749 10 63182801 to 63182808 7 + TSS region transcription start site region 93749
Cpgi1646 10 63192448 to 63193204 756 CpG island CpG island 1646
n-TMcat18 10 63194240 to 63194332 92 - tRNA gene nuclear encoded tRNA methionine 18 (anticodon CAT)
Tssr97906 10 63203866 to 63203877 11 - TSS region transcription start site region 97906
Tssr97907 10 63203882 to 63203887 5 - TSS region transcription start site region 97907
Tssr97908 10 63203899 to 63203920 21 - TSS region transcription start site region 97908
Tssr97909 10 63203930 to 63203956 26 - TSS region transcription start site region 97909
1700120B22Rik 10 63243068 to 63244153 1085 - bidirectional promoter lncRNA gene RIKEN cDNA 1700120B22 gene
Tssr97910 10 63243634 to 63243672 38 - TSS region transcription start site region 97910
Cpgi1647 10 63243637 to 63244578 941 CpG island CpG island 1647
Tssr93750 10 63243760 to 63243771 11 + TSS region transcription start site region 93750
Tssr93751 10 63243785 to 63243846 61 + TSS region transcription start site region 93751
Herc4 10 63243810 to 63317878 74068 + protein coding gene hect domain and RLD 4
Tssr93752 10 63243888 to 63243964 76 + TSS region transcription start site region 93752
Tssr93753 10 63243974 to 63243986 12 + TSS region transcription start site region 93753
Tssr93754 10 63244002 to 63244013 11 + TSS region transcription start site region 93754
Tssr97911 10 63244135 to 63244170 35 - TSS region transcription start site region 97911
Gm19337 10 63250932 to 63252515 1583 + unclassified gene predicted gene, 19337
Gm47615 10 63270090 to 63270868 778 + unclassified gene predicted gene, 47615
Tssr93755 10 63280964 to 63280976 12 + TSS region transcription start site region 93755
D230019N24Rik 10 63292285 to 63295792 3507 unclassified gene RIKEN cDNA D230019N24 gene
Gm26789 10 63292286 to 63295793 3507 - antisense lncRNA gene predicted gene, 26789
Sirt1 10 63319005 to 63339035 20030 - protein coding gene sirtuin 1
Tssr97912 10 63338124 to 63338129 5 - TSS region transcription start site region 97912
Cpgi1648 10 63338156 to 63339875 1719 CpG island CpG island 1648
Tssr97913 10 63338973 to 63338992 19 - TSS region transcription start site region 97913
Tssr97914 10 63339023 to 63339042 19 - TSS region transcription start site region 97914
Tssr97915 10 63339057 to 63339068 11 - TSS region transcription start site region 97915
Gm16145 10 63353853 to 63366887 13034 + antisense lncRNA gene predicted gene 16145