Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:63052448-63333204

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pbld2 10 63024315 to 63058813 34498 + protein coding gene phenazine biosynthesis-like protein domain containing 2
Gm16143 10 63055603 to 63056819 1216 - antisense lncRNA gene predicted gene 16143
Tssr97904 10 63057444 to 63057459 15 - TSS region transcription start site region 97904
Tssr97905 10 63057472 to 63057490 18 - TSS region transcription start site region 97905
Pbld1 10 63060624 to 63077964 17340 + protein coding gene phenazine biosynthesis-like protein domain containing 1
Tssr93744 10 63060630 to 63060657 27 + TSS region transcription start site region 93744
Tssr93745 10 63060725 to 63060752 27 + TSS region transcription start site region 93745
Tssr93746 10 63061535 to 63061548 13 + TSS region transcription start site region 93746
Tssr93747 10 63061586 to 63061602 16 + TSS region transcription start site region 93747
Gm48072 10 63072052 to 63075060 3008 - antisense lncRNA gene predicted gene, 48072
Gm38063 10 63098349 to 63098690 341 + unclassified gene predicted gene, 38063
Atoh7 10 63099651 to 63101279 1628 + protein coding gene atonal bHLH transcription factor 7
Cpgi1644 10 63099698 to 63100893 1195 CpG island CpG island 1644
Tssr93748 10 63099782 to 63099792 10 + TSS region transcription start site region 93748
Mypn 10 63115795 to 63203952 88157 - protein coding gene myopalladin
Cpgi1645 10 63130896 to 63131166 270 CpG island CpG island 1645
Tssr93749 10 63182801 to 63182808 7 + TSS region transcription start site region 93749
Cpgi1646 10 63192448 to 63193204 756 CpG island CpG island 1646
n-TMcat18 10 63194240 to 63194332 92 - tRNA gene nuclear encoded tRNA methionine 18 (anticodon CAT)
Tssr97906 10 63203866 to 63203877 11 - TSS region transcription start site region 97906
Tssr97907 10 63203882 to 63203887 5 - TSS region transcription start site region 97907
Tssr97908 10 63203899 to 63203920 21 - TSS region transcription start site region 97908
Tssr97909 10 63203930 to 63203956 26 - TSS region transcription start site region 97909
1700120B22Rik 10 63243068 to 63244153 1085 - bidirectional promoter lncRNA gene RIKEN cDNA 1700120B22 gene
Tssr97910 10 63243634 to 63243672 38 - TSS region transcription start site region 97910
Cpgi1647 10 63243637 to 63244578 941 CpG island CpG island 1647
Tssr93750 10 63243760 to 63243771 11 + TSS region transcription start site region 93750
Tssr93751 10 63243785 to 63243846 61 + TSS region transcription start site region 93751
Herc4 10 63243810 to 63317878 74068 + protein coding gene hect domain and RLD 4
Tssr93752 10 63243888 to 63243964 76 + TSS region transcription start site region 93752
Tssr93753 10 63243974 to 63243986 12 + TSS region transcription start site region 93753
Tssr93754 10 63244002 to 63244013 11 + TSS region transcription start site region 93754
Tssr97911 10 63244135 to 63244170 35 - TSS region transcription start site region 97911
Gm19337 10 63250932 to 63252515 1583 + unclassified gene predicted gene, 19337
Gm47615 10 63270090 to 63270868 778 + unclassified gene predicted gene, 47615
Tssr93755 10 63280964 to 63280976 12 + TSS region transcription start site region 93755
D230019N24Rik 10 63292285 to 63295792 3507 unclassified gene RIKEN cDNA D230019N24 gene
Gm26789 10 63292286 to 63295793 3507 - antisense lncRNA gene predicted gene, 26789
Sirt1 10 63319005 to 63339035 20030 - protein coding gene sirtuin 1