Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:62979698-63220893

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi1641 10 62979975 to 62980914 939 CpG island CpG island 1641
Rufy2 10 62980223 to 63017210 36987 + protein coding gene RUN and FYVE domain-containing 2
Tssr93740 10 62980233 to 62980261 28 + TSS region transcription start site region 93740
Tssr93741 10 62980280 to 62980291 11 + TSS region transcription start site region 93741
Cpgi1642 10 62990823 to 62990990 167 CpG island CpG island 1642
Gm16135 10 62998779 to 62999689 910 + antisense lncRNA gene predicted gene 16135
Hnrnph3 10 63014664 to 63023932 9268 - protein coding gene heterogeneous nuclear ribonucleoprotein H3
Tssr97894 10 63017589 to 63017611 22 - TSS region transcription start site region 97894
Tssr97895 10 63018085 to 63018111 26 - TSS region transcription start site region 97895
Tssr97896 10 63019904 to 63019911 7 - TSS region transcription start site region 97896
Cpgi1643 10 63022758 to 63024444 1686 CpG island CpG island 1643
Tssr93742 10 63023333 to 63023352 19 + TSS region transcription start site region 93742
Tssr97897 10 63023734 to 63023741 7 - TSS region transcription start site region 97897
Tssr97898 10 63023762 to 63023765 3 - TSS region transcription start site region 97898
Tssr97899 10 63023776 to 63023784 8 - TSS region transcription start site region 97899
Tssr97900 10 63023806 to 63023824 18 - TSS region transcription start site region 97900
Tssr97901 10 63023860 to 63023871 11 - TSS region transcription start site region 97901
Tssr97902 10 63023881 to 63023907 26 - TSS region transcription start site region 97902
Tssr97903 10 63023913 to 63023918 5 - TSS region transcription start site region 97903
Pbld2 10 63024315 to 63058813 34498 + protein coding gene phenazine biosynthesis-like protein domain containing 2
Tssr93743 10 63039101 to 63039117 16 + TSS region transcription start site region 93743
Gm16143 10 63055603 to 63056819 1216 - antisense lncRNA gene predicted gene 16143
Tssr97904 10 63057444 to 63057459 15 - TSS region transcription start site region 97904
Tssr97905 10 63057472 to 63057490 18 - TSS region transcription start site region 97905
Pbld1 10 63060624 to 63077964 17340 + protein coding gene phenazine biosynthesis-like protein domain containing 1
Tssr93744 10 63060630 to 63060657 27 + TSS region transcription start site region 93744
Tssr93745 10 63060725 to 63060752 27 + TSS region transcription start site region 93745
Tssr93746 10 63061535 to 63061548 13 + TSS region transcription start site region 93746
Tssr93747 10 63061586 to 63061602 16 + TSS region transcription start site region 93747
Gm48072 10 63072052 to 63075060 3008 - antisense lncRNA gene predicted gene, 48072
Gm38063 10 63098349 to 63098690 341 + unclassified gene predicted gene, 38063
Atoh7 10 63099651 to 63101279 1628 + protein coding gene atonal bHLH transcription factor 7
Cpgi1644 10 63099698 to 63100893 1195 CpG island CpG island 1644
Tssr93748 10 63099782 to 63099792 10 + TSS region transcription start site region 93748
Mypn 10 63115795 to 63203952 88157 - protein coding gene myopalladin
Cpgi1645 10 63130896 to 63131166 270 CpG island CpG island 1645
Tssr93749 10 63182801 to 63182808 7 + TSS region transcription start site region 93749
Cpgi1646 10 63192448 to 63193204 756 CpG island CpG island 1646
n-TMcat18 10 63194240 to 63194332 92 - tRNA gene nuclear encoded tRNA methionine 18 (anticodon CAT)
Tssr97906 10 63203866 to 63203877 11 - TSS region transcription start site region 97906
Tssr97907 10 63203882 to 63203887 5 - TSS region transcription start site region 97907
Tssr97908 10 63203899 to 63203920 21 - TSS region transcription start site region 97908
Tssr97909 10 63203930 to 63203956 26 - TSS region transcription start site region 97909