MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 10:62382427-62462448

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Hkdc1	10	62383137 to 62422464	39327	-	protein coding gene	hexokinase domain containing 1
n-TAagc6	10	62391124 to 62391196	72	-	tRNA gene	nuclear encoded tRNA alanine 6 (anticodon AGC)
Cpgi1626	10	62401646 to 62401931	285		CpG island	CpG island 1626
Cpgi1627	10	62405152 to 62405609	457		CpG island	CpG island 1627
Tssr97815	10	62422364 to 62422375	11	-	TSS region	transcription start site region 97815
Tssr97816	10	62422398 to 62422409	11	-	TSS region	transcription start site region 97816
Tssr97817	10	62422418 to 62422425	7	-	TSS region	transcription start site region 97817
Tssr97818	10	62422427 to 62422448	21	-	TSS region	transcription start site region 97818
Gm30322	10	62422506 to 62430006	7500	+	lncRNA gene	predicted gene, 30322
Supv3l1	10	62429209 to 62449738	20529	-	protein coding gene	suppressor of var1, 3-like 1 (S. cerevisiae)
Tssr93709	10	62432649 to 62432656	7	+	TSS region	transcription start site region 93709
Cpgi1628	10	62449213 to 62450386	1173		CpG island	CpG island 1628
4930507D05Rik	10	62449489 to 62451322	1833	+	unclassified gene	RIKEN cDNA 4930507D05 gene
Tssr97819	10	62449679 to 62449733	54	-	TSS region	transcription start site region 97819
Tssr97820	10	62449738 to 62449757	19	-	TSS region	transcription start site region 97820
Vps26a	10	62455235 to 62486805	31570	-	protein coding gene	VPS26 retromer complex component A
Tssr97821	10	62455680 to 62455692	12	-	TSS region	transcription start site region 97821
Tssr97822	10	62456310 to 62456322	12	-	TSS region	transcription start site region 97822