Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:61430782-61520834

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eif4ebp2 10 61428491 to 61452661 24170 - protein coding gene eukaryotic translation initiation factor 4E binding protein 2
Tssr97763 10 61432711 to 61432746 35 - TSS region transcription start site region 97763
Tssr97764 10 61432768 to 61432821 53 - TSS region transcription start site region 97764
Tssr97765 10 61432933 to 61432948 15 - TSS region transcription start site region 97765
Tssr97766 10 61433215 to 61433249 34 - TSS region transcription start site region 97766
Tssr97767 10 61435036 to 61435065 29 - TSS region transcription start site region 97767
A130019P10Rik 10 61440942 to 61442412 1470 unclassified gene RIKEN cDNA A130019P10 gene
Gm48086 10 61446902 to 61450717 3815 - sense intronic lncRNA gene predicted gene, 48086
Cpgi1607 10 61451959 to 61453093 1134 CpG island CpG island 1607
Tssr97768 10 61452418 to 61452434 16 - TSS region transcription start site region 97768
Tssr97769 10 61452772 to 61452813 41 - TSS region transcription start site region 97769
D830039M14Rik 10 61473576 to 61476937 3361 - antisense lncRNA gene RIKEN cDNA D830039M14 gene
Cpgi1608 10 61475327 to 61476756 1429 CpG island CpG island 1608
Tssr93666 10 61475782 to 61475834 52 + TSS region transcription start site region 93666
Lrrc20 10 61475801 to 61582791 106990 + protein coding gene leucine rich repeat containing 20
Tssr97770 10 61476675 to 61476690 15 - TSS region transcription start site region 97770
Tssr93667 10 61482132 to 61482140 8 + TSS region transcription start site region 93667
Tssr93668 10 61482272 to 61482285 13 + TSS region transcription start site region 93668
Gm47595 10 61494917 to 61496290 1373 - antisense lncRNA gene predicted gene, 47595
Gm47593 10 61496600 to 61499601 3001 - antisense lncRNA gene predicted gene, 47593
Gm17829 10 61510242 to 61510585 343 - pseudogene predicted gene, 17829