Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:61243715-61423893

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Adamts14 10 61197112 to 61273438 76326 - protein coding gene a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14
Cpgi1603 10 61245772 to 61246165 393 CpG island CpG island 1603
Cpgi1604 10 61272888 to 61274050 1162 CpG island CpG island 1604
Tssr97757 10 61273381 to 61273404 23 - TSS region transcription start site region 97757
Tssr97758 10 61273409 to 61273453 44 - TSS region transcription start site region 97758
Prf1 10 61297546 to 61304263 6717 + protein coding gene perforin 1 (pore forming protein)
Tssr93658 10 61297728 to 61297739 11 + TSS region transcription start site region 93658
Tssr93659 10 61297749 to 61297788 39 + TSS region transcription start site region 93659
Tssr93660 10 61297799 to 61297808 9 + TSS region transcription start site region 93660
Tssr93661 10 61297809 to 61297824 15 + TSS region transcription start site region 93661
Tssr93662 10 61309802 to 61309808 6 + TSS region transcription start site region 93662
Rpl27a-ps1 10 61309830 to 61310277 447 + pseudogene ribosomal protein L27A, pseudogene 1
Pald1 10 61319656 to 61383530 63874 - protein coding gene phosphatase domain containing, paladin 1
D10Mit48 10 61333715 to 61333893 178 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 48
Tssr3215 10 61352006 to 61352008 2 + TSS region transcription start site region 3215
Gm48077 10 61359666 to 61361407 1741 + unclassified gene predicted gene, 48077
Gm48074 10 61379414 to 61381048 1634 - unclassified gene predicted gene, 48074
Cpgi1605 10 61382842 to 61383823 981 CpG island CpG island 1605
Tssr97759 10 61383332 to 61383372 40 - TSS region transcription start site region 97759
Tssr97760 10 61383374 to 61383391 17 - TSS region transcription start site region 97760
Tssr3216 10 61383450 to 61383502 52 - TSS region transcription start site region 3216
Tssr97761 10 61415607 to 61415632 25 - TSS region transcription start site region 97761
Tssr93663 10 61416279 to 61416300 21 + TSS region transcription start site region 93663
Tssr93664 10 61416530 to 61416545 15 + TSS region transcription start site region 93664
Tssr97762 10 61416700 to 61416707 7 - TSS region transcription start site region 97762
Nodal 10 61417972 to 61425337 7365 + protein coding gene nodal
Cpgi1606 10 61418208 to 61419408 1200 CpG island CpG island 1606
Tssr93665 10 61418283 to 61418289 6 + TSS region transcription start site region 93665