Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:61100654-61250671

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cfq11 10 56604060 to 61105062 4501002 QTL conditioned fear QTL 11
Sgpl1 10 61098642 to 61147684 49042 - protein coding gene sphingosine phosphate lyase 1
Tssr97750 10 61100690 to 61100710 20 - TSS region transcription start site region 97750
Tssr97751 10 61114152 to 61114167 15 - TSS region transcription start site region 97751
Gm44308 10 61125137 to 61125235 98 - miRNA gene predicted gene, 44308
Cpgi1601 10 61146144 to 61148060 1916 CpG island CpG island 1601
Tssr97752 10 61146323 to 61146337 14 - TSS region transcription start site region 97752
Tssr97753 10 61147595 to 61147620 25 - TSS region transcription start site region 97753
Tssr97754 10 61147625 to 61147644 19 - TSS region transcription start site region 97754
Tssr97755 10 61147659 to 61147680 21 - TSS region transcription start site region 97755
Tssr93647 10 61171930 to 61171943 13 + TSS region transcription start site region 93647
Tssr93648 10 61171954 to 61171970 16 + TSS region transcription start site region 93648
Tbata 10 61171964 to 61188841 16877 + protein coding gene thymus, brain and testes associated
D10Mit258 10 61172381 to 61172498 117 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 258
Tssr93649 10 61175184 to 61175200 16 + TSS region transcription start site region 93649
Tssr93650 10 61175206 to 61175222 16 + TSS region transcription start site region 93650
Tssr93651 10 61175310 to 61175318 8 + TSS region transcription start site region 93651
Tssr93652 10 61175385 to 61175399 14 + TSS region transcription start site region 93652
Tssr93653 10 61175591 to 61175601 10 + TSS region transcription start site region 93653
Tssr3214 10 61175620 to 61175637 17 + TSS region transcription start site region 3214
Tssr93654 10 61175654 to 61175671 17 + TSS region transcription start site region 93654
Tssr93655 10 61175682 to 61175693 11 + TSS region transcription start site region 93655
Tssr93656 10 61175712 to 61175729 17 + TSS region transcription start site region 93656
Cpgi1602 10 61175872 to 61176132 260 CpG island CpG island 1602
Tssr97756 10 61180379 to 61180423 44 - TSS region transcription start site region 97756
Tssr93657 10 61180474 to 61180478 4 + TSS region transcription start site region 93657
Adamts14 10 61197112 to 61273438 76326 - protein coding gene a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14
D10Mit172 10 61197984 to 61198133 149 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 172
D10Mit172.2 10 61198111 to 61198222 111 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 172.2
Gm29861 10 61215954 to 61219572 3618 + lncRNA gene predicted gene, 29861
Cpgi1603 10 61245772 to 61246165 393 CpG island CpG island 1603