Gene symbol |
Chromo- some |
Coordinates (bp, mm10) |
Size (bp) |
Strand |
Feature Type |
Gene name |
---|---|---|---|---|---|---|
Cfq11 | 10 | 4501002 | QTL | conditioned fear QTL 11 | ||
Cdh23 | 10 | 393742 | - | protein coding gene | cadherin 23 (otocadherin) | |
Tssr97725 | 10 | 1 | - | TSS region | transcription start site region 97725 | |
Tssr3213 | 10 | 22 | + | TSS region | transcription start site region 3213 | |
Cpgi1592 | 10 | 415 | CpG island | CpG island 1592 | ||
Cpgi1593 | 10 | 2206 | CpG island | CpG island 1593 | ||
Tssr97726 | 10 | 20 | - | TSS region | transcription start site region 97726 | |
Tssr97727 | 10 | 38 | - | TSS region | transcription start site region 97727 | |
Cpgi1594 | 10 | 281 | CpG island | CpG island 1594 | ||
Tssr97728 | 10 | 35 | - | TSS region | transcription start site region 97728 | |
Slc29a3 | 10 | 40722 | - | protein coding gene | solute carrier family 29 (nucleoside transporters), member 3 | |
Tssr97729 | 10 | 22 | - | TSS region | transcription start site region 97729 | |
Tssr97730 | 10 | 22 | - | TSS region | transcription start site region 97730 | |
Tssr97731 | 10 | 4 | - | TSS region | transcription start site region 97731 | |
Tssr97732 | 10 | 16 | - | TSS region | transcription start site region 97732 | |
Tssr93638 | 10 | 6 | + | TSS region | transcription start site region 93638 | |
Cpgi1595 | 10 | 464 | CpG island | CpG island 1595 | ||
Tssr97733 | 10 | 47 | - | TSS region | transcription start site region 97733 | |
Unc5b | 10 | 68988 | - | protein coding gene | unc-5 netrin receptor B | |
Cpgi1596 | 10 | 328 | CpG island | CpG island 1596 | ||
Cpgi1597 | 10 | 335 | CpG island | CpG island 1597 | ||
Gm19972 | 10 | 5663 | - | unclassified non-coding RNA gene | predicted gene, 19972 | |
Tssr97734 | 10 | 18 | - | TSS region | transcription start site region 97734 | |
Cpgi1598 | 10 | 849 | CpG island | CpG island 1598 | ||
Cpgi1599 | 10 | 1484 | CpG island | CpG island 1599 | ||
Tssr97735 | 10 | 12 | - | TSS region | transcription start site region 97735 | |
Tssr97736 | 10 | 20 | - | TSS region | transcription start site region 97736 | |
Tssr97737 | 10 | 18 | - | TSS region | transcription start site region 97737 | |
Tssr97738 | 10 | 17 | - | TSS region | transcription start site region 97738 | |
Tssr97739 | 10 | 14 | - | TSS region | transcription start site region 97739 | |
Tssr97740 | 10 | 27 | - | TSS region | transcription start site region 97740 | |
Gm36750 | 10 | 1879 | + | lncRNA gene | predicted gene, 36750 | |
Tssr93639 | 10 | 3 | + | TSS region | transcription start site region 93639 | |
Mir6408 | 10 | 90 | + | miRNA gene | microRNA 6408 | |
Gm46227 | 10 | 982 | + | lncRNA gene | predicted gene, 46227 | |
Pldi | 10 | 9906 | - | lincRNA gene | polymorphic derived intron containing | |
Gm26947 | 10 | 8648 | + | antisense lncRNA gene | predicted gene, 26947 | |
Tssr93640 | 10 | 14 | + | TSS region | transcription start site region 93640 | |
Tssr93641 | 10 | 14 | + | TSS region | transcription start site region 93641 | |
Tssr93642 | 10 | 27 | + | TSS region | transcription start site region 93642 | |
Tssr93643 | 10 | 12 | + | TSS region | transcription start site region 93643 | |
Tssr97741 | 10 | 15 | - | TSS region | transcription start site region 97741 | |
Tssr97742 | 10 | 19 | - | TSS region | transcription start site region 97742 | |
Tssr97743 | 10 | 10 | - | TSS region | transcription start site region 97743 | |
Mir466j | 10 | 121 | + | miRNA gene | microRNA 466j | |
Tssr93644 | 10 | 39 | + | TSS region | transcription start site region 93644 | |
Gm20611 | 10 | 6777 | + | lincRNA gene | predicted gene 20611 | |
Gm20625 | 10 | 4582 | - | lincRNA gene | predicted gene 20625 | |
Gm20610 | 10 | 5478 | - | lincRNA gene | predicted gene 20610 | |
Cpgi1600 | 10 | 446 | CpG island | CpG island 1600 | ||
Tssr93645 | 10 | 18 | + | TSS region | transcription start site region 93645 | |
Pcbd1 | 10 | 4993 | + | protein coding gene | pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 1 | |
Tssr93646 | 10 | 48 | + | TSS region | transcription start site region 93646 | |
Sgpl1 | 10 | 49042 | - | protein coding gene | sphingosine phosphate lyase 1 | |
Tssr97744 | 10 | 80 | - | TSS region | transcription start site region 97744 | |
Tssr97745 | 10 | 12 | - | TSS region | transcription start site region 97745 | |
Tssr97746 | 10 | 40 | - | TSS region | transcription start site region 97746 | |
Tssr97747 | 10 | 14 | - | TSS region | transcription start site region 97747 | |
Tssr97748 | 10 | 20 | - | TSS region | transcription start site region 97748 | |
Tssr97749 | 10 | 16 | - | TSS region | transcription start site region 97749 | |
Tssr97750 | 10 | 20 | - | TSS region | transcription start site region 97750 | |
Tssr97751 | 10 | 15 | - | TSS region | transcription start site region 97751 | |
Gm44308 | 10 | 98 | - | miRNA gene | predicted gene, 44308 | |
Cpgi1601 | 10 | 1916 | CpG island | CpG island 1601 | ||
Tssr97752 | 10 | 14 | - | TSS region | transcription start site region 97752 | |
Tssr97753 | 10 | 25 | - | TSS region | transcription start site region 97753 | |
Tssr97754 | 10 | 19 | - | TSS region | transcription start site region 97754 | |
Tssr97755 | 10 | 21 | - | TSS region | transcription start site region 97755 | |
Tssr93647 | 10 | 13 | + | TSS region | transcription start site region 93647 | |
Tssr93648 | 10 | 16 | + | TSS region | transcription start site region 93648 | |
Tbata | 10 | 16877 | + | protein coding gene | thymus, brain and testes associated | |
D10Mit258 | 10 | 117 | DNA segment | DNA Segment, Chr 10, Massachusetts Institute of Technology 258 | ||
Tssr93649 | 10 | 16 | + | TSS region | transcription start site region 93649 | |
Tssr93650 | 10 | 16 | + | TSS region | transcription start site region 93650 | |
Tssr93651 | 10 | 8 | + | TSS region | transcription start site region 93651 | |
Tssr93652 | 10 | 14 | + | TSS region | transcription start site region 93652 | |
Tssr93653 | 10 | 10 | + | TSS region | transcription start site region 93653 | |
Tssr3214 | 10 | 17 | + | TSS region | transcription start site region 3214 | |
Tssr93654 | 10 | 17 | + | TSS region | transcription start site region 93654 | |
Tssr93655 | 10 | 11 | + | TSS region | transcription start site region 93655 | |
Tssr93656 | 10 | 17 | + | TSS region | transcription start site region 93656 | |
Cpgi1602 | 10 | 260 | CpG island | CpG island 1602 | ||
Tssr97756 | 10 | 44 | - | TSS region | transcription start site region 97756 | |
Tssr93657 | 10 | 4 | + | TSS region | transcription start site region 93657 | |
Adamts14 | 10 | 76326 | - | protein coding gene | a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 | |
D10Mit172 | 10 | 149 | DNA segment | DNA segment, Chr 10, Massachusetts Institute of Technology 172 | ||
D10Mit172.2 | 10 | 111 | DNA segment | DNA segment, Chr 10, Massachusetts Institute of Technology 172.2 | ||
Gm29861 | 10 | 3618 | + | lncRNA gene | predicted gene, 29861 | |
Cpgi1603 | 10 | 393 | CpG island | CpG island 1603 | ||
Cpgi1604 | 10 | 1162 | CpG island | CpG island 1604 | ||
Tssr97757 | 10 | 23 | - | TSS region | transcription start site region 97757 | |
Tssr97758 | 10 | 44 | - | TSS region | transcription start site region 97758 | |
Prf1 | 10 | 6717 | + | protein coding gene | perforin 1 (pore forming protein) | |
Tssr93658 | 10 | 11 | + | TSS region | transcription start site region 93658 | |
Tssr93659 | 10 | 39 | + | TSS region | transcription start site region 93659 | |
Tssr93660 | 10 | 9 | + | TSS region | transcription start site region 93660 | |
Tssr93661 | 10 | 15 | + | TSS region | transcription start site region 93661 | |
Tssr93662 | 10 | 6 | + | TSS region | transcription start site region 93662 | |
Rpl27a-ps1 | 10 | 447 | + | pseudogene | ribosomal protein L27A, pseudogene 1 | |
Pald1 | 10 | 63874 | - | protein coding gene | phosphatase domain containing, paladin 1 | |
D10Mit48 | 10 | 178 | DNA segment | DNA segment, Chr 10, Massachusetts Institute of Technology 48 | ||
Tssr3215 | 10 | 2 | + | TSS region | transcription start site region 3215 | |
Gm48077 | 10 | 1741 | + | unclassified gene | predicted gene, 48077 | |
Gm48074 | 10 | 1634 | - | unclassified gene | predicted gene, 48074 | |
Cpgi1605 | 10 | 981 | CpG island | CpG island 1605 | ||
Tssr97759 | 10 | 40 | - | TSS region | transcription start site region 97759 | |
Tssr97760 | 10 | 17 | - | TSS region | transcription start site region 97760 | |
Tssr3216 | 10 | 52 | - | TSS region | transcription start site region 3216 | |
Tssr97761 | 10 | 25 | - | TSS region | transcription start site region 97761 | |
Tssr93663 | 10 | 21 | + | TSS region | transcription start site region 93663 | |
Tssr93664 | 10 | 15 | + | TSS region | transcription start site region 93664 | |
Tssr97762 | 10 | 7 | - | TSS region | transcription start site region 97762 | |
Nodal | 10 | 7365 | + | protein coding gene | nodal | |
Cpgi1606 | 10 | 1200 | CpG island | CpG island 1606 | ||
Tssr93665 | 10 | 6 | + | TSS region | transcription start site region 93665 | |
D10Mit112.1 | 10 | 194 | DNA segment | DNA segment, Chr 10, Massachusetts Institute of Technology 112.1 | ||
D10Mit112 | 10 | 130 | DNA segment | DNA segment, Chr 10, Massachusetts Institute of Technology 112 | ||
D10Mit112.2 | 10 | 115 | DNA segment | DNA segment, Chr 10, Massachusetts Institute of Technology 112.2 | ||
Eif4ebp2 | 10 | 24170 | - | protein coding gene | eukaryotic translation initiation factor 4E binding protein 2 | |
Tssr97763 | 10 | 35 | - | TSS region | transcription start site region 97763 | |
Tssr97764 | 10 | 53 | - | TSS region | transcription start site region 97764 | |
Tssr97765 | 10 | 15 | - | TSS region | transcription start site region 97765 | |
Tssr97766 | 10 | 34 | - | TSS region | transcription start site region 97766 | |
Tssr97767 | 10 | 29 | - | TSS region | transcription start site region 97767 | |
A130019P10Rik | 10 | 1470 | unclassified gene | RIKEN cDNA A130019P10 gene | ||
Gm48086 | 10 | 3815 | - | sense intronic lncRNA gene | predicted gene, 48086 | |
Cpgi1607 | 10 | 1134 | CpG island | CpG island 1607 | ||
Tssr97768 | 10 | 16 | - | TSS region | transcription start site region 97768 | |
Tssr97769 | 10 | 41 | - | TSS region | transcription start site region 97769 | |
D830039M14Rik | 10 | 3361 | - | antisense lncRNA gene | RIKEN cDNA D830039M14 gene | |
Cpgi1608 | 10 | 1429 | CpG island | CpG island 1608 | ||
Tssr93666 | 10 | 52 | + | TSS region | transcription start site region 93666 | |
Lrrc20 | 10 | 106990 | + | protein coding gene | leucine rich repeat containing 20 | |
Tssr97770 | 10 | 15 | - | TSS region | transcription start site region 97770 | |
Tssr93667 | 10 | 8 | + | TSS region | transcription start site region 93667 | |
Tssr93668 | 10 | 13 | + | TSS region | transcription start site region 93668 | |
Gm47595 | 10 | 1373 | - | antisense lncRNA gene | predicted gene, 47595 | |
Gm47593 | 10 | 3001 | - | antisense lncRNA gene | predicted gene, 47593 | |
Gm17829 | 10 | 343 | - | pseudogene | predicted gene, 17829 | |
Gm47594 | 10 | 4153 | + | unclassified gene | predicted gene, 47594 | |
Gm28447 | 10 | 25681 | - | unclassified non-coding RNA gene | predicted gene 28447 | |
4930516E23Rik | 10 | 976 | unclassified gene | RIKEN cDNA 4930516E23 gene | ||
Cpgi1609 | 10 | 620 | CpG island | CpG island 1609 | ||
Tssr93669 | 10 | 4 | + | TSS region | transcription start site region 93669 | |
Npffr1 | 10 | 33073 | + | protein coding gene | neuropeptide FF receptor 1 | |
Cpgi1610 | 10 | 409 | CpG island | CpG island 1610 | ||
Cpgi1611 | 10 | 1138 | CpG island | CpG island 1611 | ||
Cpgi1612 | 10 | 1006 | CpG island | CpG island 1612 | ||
Tssr97771 | 10 | 46 | - | TSS region | transcription start site region 97771 | |
Tssr93670 | 10 | 18 | + | TSS region | transcription start site region 93670 | |
Tssr93671 | 10 | 49 | + | TSS region | transcription start site region 93671 | |
Ppa1 | 10 | 25544 | + | protein coding gene | pyrophosphatase (inorganic) 1 | |
Tssr93672 | 10 | 20 | + | TSS region | transcription start site region 93672 | |
Tssr93673 | 10 | 13 | + | TSS region | transcription start site region 93673 | |
1700022H01Rik | 10 | 5466 | - | bidirectional promoter lncRNA gene | RIKEN cDNA 1700022H01 gene | |
Cpgi1613 | 10 | 899 | CpG island | CpG island 1613 | ||
Tssr97772 | 10 | 24 | - | TSS region | transcription start site region 97772 | |
Tssr97773 | 10 | 11 | - | TSS region | transcription start site region 97773 | |
Tssr97774 | 10 | 17 | - | TSS region | transcription start site region 97774 | |
Tssr97775 | 10 | 11 | - | TSS region | transcription start site region 97775 | |
Tssr93674 | 10 | 59 | + | TSS region | transcription start site region 93674 | |
Sar1a | 10 | 12993 | + | protein coding gene | secretion associated Ras related GTPase 1A | |
Tssr93675 | 10 | 37 | + | TSS region | transcription start site region 93675 | |
Cpgi1614 | 10 | 1991 | CpG island | CpG island 1614 | ||
Tssr93676 | 10 | 73 | + | TSS region | transcription start site region 93676 | |
Tysnd1 | 10 | 7259 | + | protein coding gene | trypsin domain containing 1 | |
Cpgi1615 | 10 | 478 | CpG island | CpG island 1615 | ||
Aifm2 | 10 | 23997 | + | protein coding gene | apoptosis-inducing factor, mitochondrion-associated 2 | |
Tssr93677 | 10 | 48 | + | TSS region | transcription start site region 93677 | |
Tssr93678 | 10 | 29 | + | TSS region | transcription start site region 93678 | |
Tssr93679 | 10 | 12 | + | TSS region | transcription start site region 93679 | |
Tssr93680 | 10 | 7 | + | TSS region | transcription start site region 93680 | |
Tssr93681 | 10 | 18 | + | TSS region | transcription start site region 93681 | |
H2afy2 | 10 | 45463 | - | protein coding gene | H2A histone family, member Y2 | |
Cpgi1616 | 10 | 421 | CpG island | CpG island 1616 | ||
Mir5108 | 10 | 84 | + | miRNA gene | microRNA 5108 | |
Gm2137 | 10 | 2525 | + | protein coding gene | predicted gene 2137 | |
Cpgi1617 | 10 | 1716 | CpG island | CpG island 1617 | ||
Tssr93682 | 10 | 23 | + | TSS region | transcription start site region 93682 | |
Tssr93683 | 10 | 30 | + | TSS region | transcription start site region 93683 | |
Tssr3217 | 10 | 14 | - | TSS region | transcription start site region 3217 | |
Tssr97776 | 10 | 38 | - | TSS region | transcription start site region 97776 | |
Tssr97777 | 10 | 13 | - | TSS region | transcription start site region 97777 | |
Tssr97778 | 10 | 3 | - | TSS region | transcription start site region 97778 | |
Tssr97779 | 10 | 16 | - | TSS region | transcription start site region 97779 | |
Tssr97780 | 10 | 2 | - | TSS region | transcription start site region 97780 | |
Tssr3218 | 10 | 21 | - | TSS region | transcription start site region 3218 | |
D10Mit196 | 10 | 202 | DNA segment | DNA segment, Chr 10, Massachusetts Institute of Technology 196 | ||
Col13a1 | 10 | 140872 | - | protein coding gene | collagen, type XIII, alpha 1 | |
Gm40674 | 10 | 29752 | + | lncRNA gene | predicted gene, 40674 | |
Tssr93684 | 10 | 21 | + | TSS region | transcription start site region 93684 | |
Tssr93685 | 10 | 10 | + | TSS region | transcription start site region 93685 | |
Tssr97781 | 10 | 14 | - | TSS region | transcription start site region 97781 | |
Tssr3219 | 10 | 1 | - | TSS region | transcription start site region 3219 | |
Gm30121 | 10 | 16480 | + | lncRNA gene | predicted gene, 30121 | |
8030450C14Rik | 10 | 787 | unclassified gene | RIKEN cDNA 8030450C14 gene | ||
Tssr93686 | 10 | 7 | + | TSS region | transcription start site region 93686 | |
Gm5750 | 10 | 800 | + | pseudogene | predicted gene 5750 | |
Cpgi1618 | 10 | 1960 | CpG island | CpG island 1618 | ||
Tssr97782 | 10 | 32 | - | TSS region | transcription start site region 97782 |