Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:60216288-61216310

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233 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cfq11 10 56604060 to 61105062 4501002 QTL conditioned fear QTL 11
Chst3 10 60181532 to 60219260 37728 - protein coding gene carbohydrate sulfotransferase 3
Cpgi1587 10 60218248 to 60219707 1459 CpG island CpG island 1587
Tssr93532 10 60218936 to 60218947 11 + TSS region transcription start site region 93532
Tssr93533 10 60219028 to 60219034 6 + TSS region transcription start site region 93533
Tssr97698 10 60219264 to 60219295 31 - TSS region transcription start site region 97698
Tssr97699 10 60219298 to 60219345 47 - TSS region transcription start site region 97699
Tssr97700 10 60220027 to 60220038 11 - TSS region transcription start site region 97700
Tssr97701 10 60220045 to 60220073 28 - TSS region transcription start site region 97701
Gm2038 10 60227989 to 60228859 870 - pseudogene predicted gene 2038
Tssr97702 10 60245178 to 60245219 41 - TSS region transcription start site region 97702
Cpgi1588 10 60257383 to 60257686 303 CpG island CpG island 1588
Tssr93534 10 60261224 to 60261253 29 + TSS region transcription start site region 93534
Tssr93535 10 60266880 to 60266883 3 + TSS region transcription start site region 93535
Tssr93536 10 60266907 to 60266916 9 + TSS region transcription start site region 93536
Tssr93537 10 60266921 to 60266932 11 + TSS region transcription start site region 93537
Tssr93538 10 60266956 to 60266980 24 + TSS region transcription start site region 93538
Tssr93539 10 60266983 to 60267026 43 + TSS region transcription start site region 93539
Tssr93540 10 60267042 to 60267059 17 + TSS region transcription start site region 93540
Tssr93541 10 60267086 to 60267089 3 + TSS region transcription start site region 93541
Tssr93542 10 60267112 to 60267124 12 + TSS region transcription start site region 93542
Tssr93543 10 60267185 to 60267195 10 + TSS region transcription start site region 93543
Tssr93544 10 60267242 to 60267258 16 + TSS region transcription start site region 93544
Cpgi1589 10 60277400 to 60278242 842 CpG island CpG island 1589
Tssr97703 10 60277460 to 60277492 32 - TSS region transcription start site region 97703
Tssr93545 10 60277539 to 60277542 3 + TSS region transcription start site region 93545
Psap 10 60277627 to 60302597 24970 + protein coding gene prosaposin
Tssr93546 10 60277681 to 60277692 11 + TSS region transcription start site region 93546
Tssr93547 10 60277702 to 60277719 17 + TSS region transcription start site region 93547
Tssr93548 10 60277993 to 60278006 13 + TSS region transcription start site region 93548
Tssr93549 10 60278477 to 60278527 50 + TSS region transcription start site region 93549
Tssr93550 10 60278559 to 60278564 5 + TSS region transcription start site region 93550
Tssr93551 10 60278669 to 60278680 11 + TSS region transcription start site region 93551
Tssr93552 10 60279803 to 60279807 4 + TSS region transcription start site region 93552
Tssr93553 10 60284425 to 60284435 10 + TSS region transcription start site region 93553
Tssr93554 10 60284437 to 60284494 57 + TSS region transcription start site region 93554
Tssr93555 10 60291673 to 60291687 14 + TSS region transcription start site region 93555
Tssr93556 10 60291723 to 60291736 13 + TSS region transcription start site region 93556
Tssr93557 10 60292500 to 60292514 14 + TSS region transcription start site region 93557
Tssr97704 10 60292565 to 60292589 24 - TSS region transcription start site region 97704
Tssr93558 10 60292604 to 60292615 11 + TSS region transcription start site region 93558
Tssr93559 10 60292846 to 60292850 4 + TSS region transcription start site region 93559
Tssr93560 10 60293344 to 60293359 15 + TSS region transcription start site region 93560
Tssr93561 10 60293381 to 60293393 12 + TSS region transcription start site region 93561
Tssr93562 10 60293399 to 60293410 11 + TSS region transcription start site region 93562
Tssr93563 10 60293416 to 60293440 24 + TSS region transcription start site region 93563
Tssr93564 10 60294525 to 60294534 9 + TSS region transcription start site region 93564
Tssr93565 10 60294536 to 60294565 29 + TSS region transcription start site region 93565
Tssr93566 10 60294585 to 60294592 7 + TSS region transcription start site region 93566
Tssr97705 10 60294590 to 60294651 61 - TSS region transcription start site region 97705
Tssr93567 10 60294594 to 60294603 9 + TSS region transcription start site region 93567
Tssr93568 10 60294613 to 60294614 1 + TSS region transcription start site region 93568
Tssr93569 10 60294634 to 60294711 77 + TSS region transcription start site region 93569
Tssr97706 10 60294692 to 60294744 52 - TSS region transcription start site region 97706
Tssr93570 10 60294959 to 60294986 27 + TSS region transcription start site region 93570
Tssr97707 10 60294989 to 60294997 8 - TSS region transcription start site region 97707
Tssr93571 10 60295066 to 60295081 15 + TSS region transcription start site region 93571
Tssr97708 10 60295067 to 60295092 25 - TSS region transcription start site region 97708
Tssr93572 10 60295930 to 60295981 51 + TSS region transcription start site region 93572
Tssr93573 10 60296384 to 60296397 13 + TSS region transcription start site region 93573
Tssr93574 10 60296421 to 60296433 12 + TSS region transcription start site region 93574
Tssr93575 10 60296479 to 60296482 3 + TSS region transcription start site region 93575
Tssr93576 10 60296715 to 60296724 9 + TSS region transcription start site region 93576
Tssr93577 10 60296772 to 60296795 23 + TSS region transcription start site region 93577
Tssr93578 10 60296806 to 60296817 11 + TSS region transcription start site region 93578
Tssr93579 10 60296912 to 60296927 15 + TSS region transcription start site region 93579
Tssr93580 10 60297015 to 60297031 16 + TSS region transcription start site region 93580
Tssr93581 10 60297360 to 60297392 32 + TSS region transcription start site region 93581
Tssr93582 10 60297400 to 60297417 17 + TSS region transcription start site region 93582
Tssr93583 10 60297695 to 60297699 4 + TSS region transcription start site region 93583
Tssr93584 10 60298206 to 60298216 10 + TSS region transcription start site region 93584
Tssr93585 10 60299092 to 60299198 106 + TSS region transcription start site region 93585
Tssr97709 10 60299145 to 60299172 27 - TSS region transcription start site region 97709
Tssr97710 10 60299173 to 60299204 31 - TSS region transcription start site region 97710
Tssr97711 10 60299211 to 60299239 28 - TSS region transcription start site region 97711
Tssr93586 10 60299452 to 60299526 74 + TSS region transcription start site region 93586
Tssr97712 10 60299489 to 60299513 24 - TSS region transcription start site region 97712
Tssr93587 10 60299529 to 60299535 6 + TSS region transcription start site region 93587
Tssr93588 10 60299790 to 60299827 37 + TSS region transcription start site region 93588
Tssr97713 10 60299827 to 60299872 45 - TSS region transcription start site region 97713
Tssr93589 10 60299849 to 60299875 26 + TSS region transcription start site region 93589
Tssr3212 10 60299878 to 60299907 29 + TSS region transcription start site region 3212
Tssr93590 10 60299916 to 60299939 23 + TSS region transcription start site region 93590
Tssr93591 10 60299945 to 60299970 25 + TSS region transcription start site region 93591
Tssr97714 10 60299962 to 60299998 36 - TSS region transcription start site region 97714
Tssr93592 10 60299981 to 60300021 40 + TSS region transcription start site region 93592
Tssr97715 10 60300010 to 60300067 57 - TSS region transcription start site region 97715
Tssr93593 10 60300135 to 60300158 23 + TSS region transcription start site region 93593
Tssr93594 10 60300166 to 60300195 29 + TSS region transcription start site region 93594
Tssr97716 10 60300177 to 60300257 80 - TSS region transcription start site region 97716
Tssr93595 10 60300198 to 60300233 35 + TSS region transcription start site region 93595
Tssr93596 10 60300238 to 60300280 42 + TSS region transcription start site region 93596
Tssr93597 10 60300531 to 60300582 51 + TSS region transcription start site region 93597
Tssr93598 10 60300586 to 60300593 7 + TSS region transcription start site region 93598
Tssr93599 10 60300775 to 60300802 27 + TSS region transcription start site region 93599
Tssr93600 10 60300812 to 60300846 34 + TSS region transcription start site region 93600
Tssr97717 10 60300860 to 60300885 25 - TSS region transcription start site region 97717
Tssr93601 10 60301719 to 60301730 11 + TSS region transcription start site region 93601
Tssr93602 10 60301760 to 60301769 9 + TSS region transcription start site region 93602
Tssr93603 10 60301772 to 60301783 11 + TSS region transcription start site region 93603
Tssr93604 10 60301805 to 60301828 23 + TSS region transcription start site region 93604
Tssr93605 10 60301905 to 60301916 11 + TSS region transcription start site region 93605
Tssr93606 10 60301918 to 60301939 21 + TSS region transcription start site region 93606
Tssr93607 10 60302015 to 60302024 9 + TSS region transcription start site region 93607
Tssr93608 10 60302042 to 60302055 13 + TSS region transcription start site region 93608
Tssr93609 10 60302083 to 60302088 5 + TSS region transcription start site region 93609
Tssr93610 10 60302108 to 60302122 14 + TSS region transcription start site region 93610
Tssr93611 10 60302184 to 60302189 5 + TSS region transcription start site region 93611
Tssr93612 10 60302265 to 60302279 14 + TSS region transcription start site region 93612
Cdh23 10 60302748 to 60696490 393742 - protein coding gene cadherin 23 (otocadherin)
Tssr93613 10 60306968 to 60306994 26 + TSS region transcription start site region 93613
Cpgi1590 10 60310913 to 60311113 200 CpG island CpG island 1590
Tssr97718 10 60331928 to 60331935 7 - TSS region transcription start site region 97718
Cpgi1591 10 60346518 to 60347283 765 CpG island CpG island 1591
Tssr93614 10 60346647 to 60346655 8 + TSS region transcription start site region 93614
Vsir 10 60346851 to 60372684 25833 + protein coding gene V-set immunoregulatory receptor
Tssr93615 10 60346896 to 60346916 20 + TSS region transcription start site region 93615
Tssr93616 10 60347281 to 60347292 11 + TSS region transcription start site region 93616
Tssr93617 10 60349318 to 60349325 7 + TSS region transcription start site region 93617
Tssr93618 10 60349352 to 60349362 10 + TSS region transcription start site region 93618
Tssr97719 10 60350402 to 60350444 42 - TSS region transcription start site region 97719
Tssr93619 10 60350695 to 60350705 10 + TSS region transcription start site region 93619
Tssr93620 10 60351054 to 60351077 23 + TSS region transcription start site region 93620
Tssr97720 10 60351851 to 60351871 20 - TSS region transcription start site region 97720
Tssr93621 10 60357984 to 60358037 53 + TSS region transcription start site region 93621
Tssr97721 10 60358047 to 60358100 53 - TSS region transcription start site region 97721
Tssr93622 10 60358096 to 60358121 25 + TSS region transcription start site region 93622
Tssr97722 10 60358214 to 60358234 20 - TSS region transcription start site region 97722
Tssr97723 10 60358249 to 60358266 17 - TSS region transcription start site region 97723
Tssr93623 10 60358482 to 60358485 3 + TSS region transcription start site region 93623
Tssr93624 10 60364236 to 60364265 29 + TSS region transcription start site region 93624
Tssr93625 10 60367575 to 60367642 67 + TSS region transcription start site region 93625
Tssr93626 10 60369680 to 60369696 16 + TSS region transcription start site region 93626
Tssr93627 10 60371812 to 60371825 13 + TSS region transcription start site region 93627
Tssr93628 10 60372488 to 60372491 3 + TSS region transcription start site region 93628
Tssr93629 10 60374760 to 60374764 4 + TSS region transcription start site region 93629
Tssr97724 10 60380222 to 60380232 10 - TSS region transcription start site region 97724
Tssr93630 10 60380587 to 60380596 9 + TSS region transcription start site region 93630
Tssr93631 10 60380646 to 60380658 12 + TSS region transcription start site region 93631
Tssr93632 10 60390783 to 60390800 17 + TSS region transcription start site region 93632
Gm17455 10 60399726 to 60403559 3833 + protein coding gene predicted gene, 17455
Tssr93633 10 60399749 to 60399772 23 + TSS region transcription start site region 93633
Tssr93634 10 60399802 to 60399805 3 + TSS region transcription start site region 93634
Tssr93635 10 60399849 to 60399876 27 + TSS region transcription start site region 93635
Tssr93636 10 60400753 to 60400764 11 + TSS region transcription start site region 93636
Tssr93637 10 60426078 to 60426080 2 + TSS region transcription start site region 93637
D10Ertd140e 10 60445908 to 60446118 210 DNA segment DNA segment, Chr 10, ERATO Doi 140, expressed
Tssr97725 10 60454947 to 60454948 1 - TSS region transcription start site region 97725
Tssr3213 10 60479684 to 60479706 22 + TSS region transcription start site region 3213
Cpgi1592 10 60566441 to 60566856 415 CpG island CpG island 1592
Cpgi1593 10 60685720 to 60687926 2206 CpG island CpG island 1593
Tssr97726 10 60687212 to 60687232 20 - TSS region transcription start site region 97726
Tssr97727 10 60687233 to 60687271 38 - TSS region transcription start site region 97727
Cpgi1594 10 60691517 to 60691798 281 CpG island CpG island 1594
Tssr97728 10 60696471 to 60696506 35 - TSS region transcription start site region 97728
Slc29a3 10 60712072 to 60752794 40722 - protein coding gene solute carrier family 29 (nucleoside transporters), member 3
Tssr97729 10 60716288 to 60716310 22 - TSS region transcription start site region 97729
Tssr97730 10 60724335 to 60724357 22 - TSS region transcription start site region 97730
Tssr97731 10 60738194 to 60738198 4 - TSS region transcription start site region 97731
Tssr97732 10 60744707 to 60744723 16 - TSS region transcription start site region 97732
Tssr93638 10 60749232 to 60749238 6 + TSS region transcription start site region 93638
Cpgi1595 10 60752484 to 60752948 464 CpG island CpG island 1595
Tssr97733 10 60752773 to 60752820 47 - TSS region transcription start site region 97733
Unc5b 10 60762593 to 60831581 68988 - protein coding gene unc-5 netrin receptor B
Cpgi1596 10 60780050 to 60780378 328 CpG island CpG island 1596
Cpgi1597 10 60807899 to 60808234 335 CpG island CpG island 1597
Gm19972 10 60808660 to 60814323 5663 - unclassified non-coding RNA gene predicted gene, 19972
Tssr97734 10 60816971 to 60816989 18 - TSS region transcription start site region 97734
Cpgi1598 10 60826390 to 60827239 849 CpG island CpG island 1598
Cpgi1599 10 60830402 to 60831886 1484 CpG island CpG island 1599
Tssr97735 10 60831434 to 60831446 12 - TSS region transcription start site region 97735
Tssr97736 10 60831452 to 60831472 20 - TSS region transcription start site region 97736
Tssr97737 10 60831491 to 60831509 18 - TSS region transcription start site region 97737
Tssr97738 10 60831571 to 60831588 17 - TSS region transcription start site region 97738
Tssr97739 10 60831603 to 60831617 14 - TSS region transcription start site region 97739
Tssr97740 10 60834965 to 60834992 27 - TSS region transcription start site region 97740
Gm36750 10 60888607 to 60890486 1879 + lncRNA gene predicted gene, 36750
Tssr93639 10 60892294 to 60892297 3 + TSS region transcription start site region 93639
Mir6408 10 60923023 to 60923113 90 + miRNA gene microRNA 6408
Gm46227 10 60927343 to 60928325 982 + lncRNA gene predicted gene, 46227
Pldi 10 60928226 to 60938132 9906 - lincRNA gene polymorphic derived intron containing
Gm26947 10 60931986 to 60940634 8648 + antisense lncRNA gene predicted gene, 26947
Tssr93640 10 60931990 to 60932004 14 + TSS region transcription start site region 93640
Tssr93641 10 60932036 to 60932050 14 + TSS region transcription start site region 93641
Tssr93642 10 60932338 to 60932365 27 + TSS region transcription start site region 93642
Tssr93643 10 60933087 to 60933099 12 + TSS region transcription start site region 93643
Tssr97741 10 60938099 to 60938114 15 - TSS region transcription start site region 97741
Tssr97742 10 60938123 to 60938142 19 - TSS region transcription start site region 97742
Tssr97743 10 60958072 to 60958082 10 - TSS region transcription start site region 97743
Mir466j 10 60960723 to 60960844 121 + miRNA gene microRNA 466j
Tssr93644 10 61031268 to 61031307 39 + TSS region transcription start site region 93644
Gm20611 10 61031303 to 61038080 6777 + lincRNA gene predicted gene 20611
Gm20625 10 61038229 to 61042811 4582 - lincRNA gene predicted gene 20625
Gm20610 10 61046422 to 61051900 5478 - lincRNA gene predicted gene 20610
Cpgi1600 10 61089237 to 61089683 446 CpG island CpG island 1600
Tssr93645 10 61089327 to 61089345 18 + TSS region transcription start site region 93645
Pcbd1 10 61089331 to 61094324 4993 + protein coding gene pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 1
Tssr93646 10 61089348 to 61089396 48 + TSS region transcription start site region 93646
Sgpl1 10 61098642 to 61147684 49042 - protein coding gene sphingosine phosphate lyase 1
Tssr97744 10 61098843 to 61098923 80 - TSS region transcription start site region 97744