Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:60109236-60619265

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170 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spock2 10 60106257 to 60135198 28941 + protein coding gene sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
Tssr93522 10 60115756 to 60115792 36 + TSS region transcription start site region 93522
Tssr93523 10 60126124 to 60126154 30 + TSS region transcription start site region 93523
Mir6906 10 60126776 to 60126833 57 + miRNA gene microRNA 6906
Tssr93524 10 60129675 to 60129681 6 + TSS region transcription start site region 93524
Tssr93525 10 60131959 to 60131970 11 + TSS region transcription start site region 93525
Tssr93526 10 60132893 to 60132915 22 + TSS region transcription start site region 93526
Tssr93527 10 60132921 to 60132961 40 + TSS region transcription start site region 93527
Tssr93528 10 60133618 to 60133647 29 + TSS region transcription start site region 93528
Tssr93529 10 60134777 to 60134810 33 + TSS region transcription start site region 93529
Tssr93530 10 60161625 to 60161637 12 + TSS region transcription start site region 93530
Tssr93531 10 60161662 to 60161669 7 + TSS region transcription start site region 93531
Tssr97693 10 60162372 to 60162382 10 - TSS region transcription start site region 97693
Tssr97694 10 60162384 to 60162398 14 - TSS region transcription start site region 97694
Tssr3211 10 60162412 to 60162415 3 - TSS region transcription start site region 3211
Chst3 10 60181532 to 60219260 37728 - protein coding gene carbohydrate sulfotransferase 3
Cpgi1585 10 60185753 to 60186873 1120 CpG island CpG island 1585
Tssr97695 10 60189711 to 60189715 4 - TSS region transcription start site region 97695
Cpgi1586 10 60191720 to 60192112 392 CpG island CpG island 1586
Gm22117 10 60211185 to 60211251 66 - miRNA gene predicted gene, 22117
Tssr97696 10 60214499 to 60214512 13 - TSS region transcription start site region 97696
Tssr97697 10 60215321 to 60215328 7 - TSS region transcription start site region 97697
Cpgi1587 10 60218248 to 60219707 1459 CpG island CpG island 1587
Tssr93532 10 60218936 to 60218947 11 + TSS region transcription start site region 93532
Tssr93533 10 60219028 to 60219034 6 + TSS region transcription start site region 93533
Tssr97698 10 60219264 to 60219295 31 - TSS region transcription start site region 97698
Tssr97699 10 60219298 to 60219345 47 - TSS region transcription start site region 97699
Tssr97700 10 60220027 to 60220038 11 - TSS region transcription start site region 97700
Tssr97701 10 60220045 to 60220073 28 - TSS region transcription start site region 97701
Gm2038 10 60227989 to 60228859 870 - pseudogene predicted gene 2038
Tssr97702 10 60245178 to 60245219 41 - TSS region transcription start site region 97702
Cpgi1588 10 60257383 to 60257686 303 CpG island CpG island 1588
Tssr93534 10 60261224 to 60261253 29 + TSS region transcription start site region 93534
Tssr93535 10 60266880 to 60266883 3 + TSS region transcription start site region 93535
Tssr93536 10 60266907 to 60266916 9 + TSS region transcription start site region 93536
Tssr93537 10 60266921 to 60266932 11 + TSS region transcription start site region 93537
Tssr93538 10 60266956 to 60266980 24 + TSS region transcription start site region 93538
Tssr93539 10 60266983 to 60267026 43 + TSS region transcription start site region 93539
Tssr93540 10 60267042 to 60267059 17 + TSS region transcription start site region 93540
Tssr93541 10 60267086 to 60267089 3 + TSS region transcription start site region 93541
Tssr93542 10 60267112 to 60267124 12 + TSS region transcription start site region 93542
Tssr93543 10 60267185 to 60267195 10 + TSS region transcription start site region 93543
Tssr93544 10 60267242 to 60267258 16 + TSS region transcription start site region 93544
Cpgi1589 10 60277400 to 60278242 842 CpG island CpG island 1589
Tssr97703 10 60277460 to 60277492 32 - TSS region transcription start site region 97703
Tssr93545 10 60277539 to 60277542 3 + TSS region transcription start site region 93545
Psap 10 60277627 to 60302597 24970 + protein coding gene prosaposin
Tssr93546 10 60277681 to 60277692 11 + TSS region transcription start site region 93546
Tssr93547 10 60277702 to 60277719 17 + TSS region transcription start site region 93547
Tssr93548 10 60277993 to 60278006 13 + TSS region transcription start site region 93548
Tssr93549 10 60278477 to 60278527 50 + TSS region transcription start site region 93549
Tssr93550 10 60278559 to 60278564 5 + TSS region transcription start site region 93550
Tssr93551 10 60278669 to 60278680 11 + TSS region transcription start site region 93551
Tssr93552 10 60279803 to 60279807 4 + TSS region transcription start site region 93552
Tssr93553 10 60284425 to 60284435 10 + TSS region transcription start site region 93553
Tssr93554 10 60284437 to 60284494 57 + TSS region transcription start site region 93554
Tssr93555 10 60291673 to 60291687 14 + TSS region transcription start site region 93555
Tssr93556 10 60291723 to 60291736 13 + TSS region transcription start site region 93556
Tssr93557 10 60292500 to 60292514 14 + TSS region transcription start site region 93557
Tssr97704 10 60292565 to 60292589 24 - TSS region transcription start site region 97704
Tssr93558 10 60292604 to 60292615 11 + TSS region transcription start site region 93558
Tssr93559 10 60292846 to 60292850 4 + TSS region transcription start site region 93559
Tssr93560 10 60293344 to 60293359 15 + TSS region transcription start site region 93560
Tssr93561 10 60293381 to 60293393 12 + TSS region transcription start site region 93561
Tssr93562 10 60293399 to 60293410 11 + TSS region transcription start site region 93562
Tssr93563 10 60293416 to 60293440 24 + TSS region transcription start site region 93563
Tssr93564 10 60294525 to 60294534 9 + TSS region transcription start site region 93564
Tssr93565 10 60294536 to 60294565 29 + TSS region transcription start site region 93565
Tssr93566 10 60294585 to 60294592 7 + TSS region transcription start site region 93566
Tssr97705 10 60294590 to 60294651 61 - TSS region transcription start site region 97705
Tssr93567 10 60294594 to 60294603 9 + TSS region transcription start site region 93567
Tssr93568 10 60294613 to 60294614 1 + TSS region transcription start site region 93568
Tssr93569 10 60294634 to 60294711 77 + TSS region transcription start site region 93569
Tssr97706 10 60294692 to 60294744 52 - TSS region transcription start site region 97706
Tssr93570 10 60294959 to 60294986 27 + TSS region transcription start site region 93570
Tssr97707 10 60294989 to 60294997 8 - TSS region transcription start site region 97707
Tssr93571 10 60295066 to 60295081 15 + TSS region transcription start site region 93571
Tssr97708 10 60295067 to 60295092 25 - TSS region transcription start site region 97708
Tssr93572 10 60295930 to 60295981 51 + TSS region transcription start site region 93572
Tssr93573 10 60296384 to 60296397 13 + TSS region transcription start site region 93573
Tssr93574 10 60296421 to 60296433 12 + TSS region transcription start site region 93574
Tssr93575 10 60296479 to 60296482 3 + TSS region transcription start site region 93575
Tssr93576 10 60296715 to 60296724 9 + TSS region transcription start site region 93576
Tssr93577 10 60296772 to 60296795 23 + TSS region transcription start site region 93577
Tssr93578 10 60296806 to 60296817 11 + TSS region transcription start site region 93578
Tssr93579 10 60296912 to 60296927 15 + TSS region transcription start site region 93579
Tssr93580 10 60297015 to 60297031 16 + TSS region transcription start site region 93580
Tssr93581 10 60297360 to 60297392 32 + TSS region transcription start site region 93581
Tssr93582 10 60297400 to 60297417 17 + TSS region transcription start site region 93582
Tssr93583 10 60297695 to 60297699 4 + TSS region transcription start site region 93583
Tssr93584 10 60298206 to 60298216 10 + TSS region transcription start site region 93584
Tssr93585 10 60299092 to 60299198 106 + TSS region transcription start site region 93585
Tssr97709 10 60299145 to 60299172 27 - TSS region transcription start site region 97709
Tssr97710 10 60299173 to 60299204 31 - TSS region transcription start site region 97710
Tssr97711 10 60299211 to 60299239 28 - TSS region transcription start site region 97711
Tssr93586 10 60299452 to 60299526 74 + TSS region transcription start site region 93586
Tssr97712 10 60299489 to 60299513 24 - TSS region transcription start site region 97712
Tssr93587 10 60299529 to 60299535 6 + TSS region transcription start site region 93587
Tssr93588 10 60299790 to 60299827 37 + TSS region transcription start site region 93588
Tssr97713 10 60299827 to 60299872 45 - TSS region transcription start site region 97713
Tssr93589 10 60299849 to 60299875 26 + TSS region transcription start site region 93589
Tssr3212 10 60299878 to 60299907 29 + TSS region transcription start site region 3212
Tssr93590 10 60299916 to 60299939 23 + TSS region transcription start site region 93590
Tssr93591 10 60299945 to 60299970 25 + TSS region transcription start site region 93591
Tssr97714 10 60299962 to 60299998 36 - TSS region transcription start site region 97714
Tssr93592 10 60299981 to 60300021 40 + TSS region transcription start site region 93592
Tssr97715 10 60300010 to 60300067 57 - TSS region transcription start site region 97715
Tssr93593 10 60300135 to 60300158 23 + TSS region transcription start site region 93593
Tssr93594 10 60300166 to 60300195 29 + TSS region transcription start site region 93594
Tssr97716 10 60300177 to 60300257 80 - TSS region transcription start site region 97716
Tssr93595 10 60300198 to 60300233 35 + TSS region transcription start site region 93595
Tssr93596 10 60300238 to 60300280 42 + TSS region transcription start site region 93596
Tssr93597 10 60300531 to 60300582 51 + TSS region transcription start site region 93597
Tssr93598 10 60300586 to 60300593 7 + TSS region transcription start site region 93598
Tssr93599 10 60300775 to 60300802 27 + TSS region transcription start site region 93599
Tssr93600 10 60300812 to 60300846 34 + TSS region transcription start site region 93600
Tssr97717 10 60300860 to 60300885 25 - TSS region transcription start site region 97717
Tssr93601 10 60301719 to 60301730 11 + TSS region transcription start site region 93601
Tssr93602 10 60301760 to 60301769 9 + TSS region transcription start site region 93602
Tssr93603 10 60301772 to 60301783 11 + TSS region transcription start site region 93603
Tssr93604 10 60301805 to 60301828 23 + TSS region transcription start site region 93604
Tssr93605 10 60301905 to 60301916 11 + TSS region transcription start site region 93605
Tssr93606 10 60301918 to 60301939 21 + TSS region transcription start site region 93606
Tssr93607 10 60302015 to 60302024 9 + TSS region transcription start site region 93607
Tssr93608 10 60302042 to 60302055 13 + TSS region transcription start site region 93608
Tssr93609 10 60302083 to 60302088 5 + TSS region transcription start site region 93609
Tssr93610 10 60302108 to 60302122 14 + TSS region transcription start site region 93610
Tssr93611 10 60302184 to 60302189 5 + TSS region transcription start site region 93611
Tssr93612 10 60302265 to 60302279 14 + TSS region transcription start site region 93612
Cdh23 10 60302748 to 60696490 393742 - protein coding gene cadherin 23 (otocadherin)
Tssr93613 10 60306968 to 60306994 26 + TSS region transcription start site region 93613
Cpgi1590 10 60310913 to 60311113 200 CpG island CpG island 1590
Tssr97718 10 60331928 to 60331935 7 - TSS region transcription start site region 97718
Cpgi1591 10 60346518 to 60347283 765 CpG island CpG island 1591
Tssr93614 10 60346647 to 60346655 8 + TSS region transcription start site region 93614
Vsir 10 60346851 to 60372684 25833 + protein coding gene V-set immunoregulatory receptor
Tssr93615 10 60346896 to 60346916 20 + TSS region transcription start site region 93615
Tssr93616 10 60347281 to 60347292 11 + TSS region transcription start site region 93616
Tssr93617 10 60349318 to 60349325 7 + TSS region transcription start site region 93617
Tssr93618 10 60349352 to 60349362 10 + TSS region transcription start site region 93618
Tssr97719 10 60350402 to 60350444 42 - TSS region transcription start site region 97719
Tssr93619 10 60350695 to 60350705 10 + TSS region transcription start site region 93619
Tssr93620 10 60351054 to 60351077 23 + TSS region transcription start site region 93620
Tssr97720 10 60351851 to 60351871 20 - TSS region transcription start site region 97720
Tssr93621 10 60357984 to 60358037 53 + TSS region transcription start site region 93621
Tssr97721 10 60358047 to 60358100 53 - TSS region transcription start site region 97721
Tssr93622 10 60358096 to 60358121 25 + TSS region transcription start site region 93622
Tssr97722 10 60358214 to 60358234 20 - TSS region transcription start site region 97722
Tssr97723 10 60358249 to 60358266 17 - TSS region transcription start site region 97723
Tssr93623 10 60358482 to 60358485 3 + TSS region transcription start site region 93623
Tssr93624 10 60364236 to 60364265 29 + TSS region transcription start site region 93624
Tssr93625 10 60367575 to 60367642 67 + TSS region transcription start site region 93625
Tssr93626 10 60369680 to 60369696 16 + TSS region transcription start site region 93626
Tssr93627 10 60371812 to 60371825 13 + TSS region transcription start site region 93627
Tssr93628 10 60372488 to 60372491 3 + TSS region transcription start site region 93628
Tssr93629 10 60374760 to 60374764 4 + TSS region transcription start site region 93629
Tssr97724 10 60380222 to 60380232 10 - TSS region transcription start site region 97724
Tssr93630 10 60380587 to 60380596 9 + TSS region transcription start site region 93630
Tssr93631 10 60380646 to 60380658 12 + TSS region transcription start site region 93631
Tssr93632 10 60390783 to 60390800 17 + TSS region transcription start site region 93632
Gm17455 10 60399726 to 60403559 3833 + protein coding gene predicted gene, 17455
Tssr93633 10 60399749 to 60399772 23 + TSS region transcription start site region 93633
Tssr93634 10 60399802 to 60399805 3 + TSS region transcription start site region 93634
Tssr93635 10 60399849 to 60399876 27 + TSS region transcription start site region 93635
Tssr93636 10 60400753 to 60400764 11 + TSS region transcription start site region 93636
Tssr93637 10 60426078 to 60426080 2 + TSS region transcription start site region 93637
D10Ertd140e 10 60445908 to 60446118 210 DNA segment DNA segment, Chr 10, ERATO Doi 140, expressed
Tssr97725 10 60454947 to 60454948 1 - TSS region transcription start site region 97725
Tssr3213 10 60479684 to 60479706 22 + TSS region transcription start site region 3213
Cpgi1592 10 60566441 to 60566856 415 CpG island CpG island 1592