Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:59553249-61163266

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327 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cfq11 10 56604060 to 61105062 4501002 QTL conditioned fear QTL 11
Mcu 10 59446984 to 59616692 169708 - protein coding gene mitochondrial calcium uniporter
Gm40671 10 59575785 to 59582407 6622 + lncRNA gene predicted gene, 40671
Tssr97665 10 59576430 to 59576435 5 - TSS region transcription start site region 97665
Tssr93487 10 59582326 to 59582338 12 + TSS region transcription start site region 93487
Tssr93488 10 59582343 to 59582360 17 + TSS region transcription start site region 93488
Tssr97666 10 59582918 to 59582933 15 - TSS region transcription start site region 97666
Tssr97667 10 59582966 to 59582984 18 - TSS region transcription start site region 97667
Tssr97668 10 59582995 to 59583007 12 - TSS region transcription start site region 97668
Tssr97669 10 59583046 to 59583058 12 - TSS region transcription start site region 97669
Tssr97670 10 59583281 to 59583294 13 - TSS region transcription start site region 97670
Tssr97671 10 59583328 to 59583341 13 - TSS region transcription start site region 97671
Tssr97672 10 59586111 to 59586114 3 - TSS region transcription start site region 97672
Cpgi1573 10 59589979 to 59590192 213 CpG island CpG island 1573
Tssr97673 10 59613143 to 59613148 5 - TSS region transcription start site region 97673
Cpgi1574 10 59615779 to 59616940 1161 CpG island CpG island 1574
Gm10322 10 59616063 to 59616398 335 + protein coding gene predicted gene 10322
Tssr97674 10 59616667 to 59616695 28 - TSS region transcription start site region 97674
Tssr93489 10 59636935 to 59636946 11 + TSS region transcription start site region 93489
Gm40672 10 59664554 to 59687234 22680 - lncRNA gene predicted gene, 40672
Cpgi1575 10 59702264 to 59702941 677 CpG island CpG island 1575
Micu1 10 59702482 to 59864134 161652 + protein coding gene mitochondrial calcium uptake 1
Tssr93490 10 59702558 to 59702628 70 + TSS region transcription start site region 93490
Tssr93491 10 59702629 to 59702643 14 + TSS region transcription start site region 93491
Tssr93492 10 59702645 to 59702663 18 + TSS region transcription start site region 93492
Gm17148 10 59708790 to 59709038 248 + pseudogene predicted gene 17148
Tssr97675 10 59733700 to 59733705 5 - TSS region transcription start site region 97675
Gm17059 10 59799199 to 59800254 1055 - antisense lncRNA gene predicted gene 17059
Tssr97676 10 59800264 to 59800273 9 - TSS region transcription start site region 97676
Gm7399 10 59806557 to 59807414 857 + pseudogene predicted gene 7399
Gm23803 10 59817666 to 59817797 131 - snoRNA gene predicted gene, 23803
Tssr97677 10 59858788 to 59858791 3 - TSS region transcription start site region 97677
Tssr93493 10 59861463 to 59861470 7 + TSS region transcription start site region 93493
Tssr93494 10 59861482 to 59861503 21 + TSS region transcription start site region 93494
Gm7413 10 59871221 to 59871682 461 - pseudogene predicted gene 7413
Tssr97678 10 59875584 to 59875588 4 - TSS region transcription start site region 97678
Cpgi1576 10 59879196 to 59880400 1204 CpG island CpG island 1576
Tssr93495 10 59879569 to 59879613 44 + TSS region transcription start site region 93495
Dnajb12 10 59879591 to 59898016 18425 + protein coding gene DnaJ heat shock protein family (Hsp40) member B12
Tssr93496 10 59879617 to 59879682 65 + TSS region transcription start site region 93496
Gm46226 10 59893882 to 59897762 3880 - lncRNA gene predicted gene, 46226
Tssr93497 10 59899035 to 59899039 4 + TSS region transcription start site region 93497
Cpgi1577 10 59899619 to 59899842 223 CpG island CpG island 1577
Tssr97679 10 59899622 to 59899640 18 - TSS region transcription start site region 97679
Tssr97680 10 59899652 to 59899679 27 - TSS region transcription start site region 97680
Tssr97681 10 59908164 to 59908206 42 - TSS region transcription start site region 97681
Gm40673 10 59909445 to 59922598 13153 + lncRNA gene predicted gene, 40673
Cpgi1578 10 59911543 to 59911837 294 CpG island CpG island 1578
Tssr93498 10 59916829 to 59916844 15 + TSS region transcription start site region 93498
Cpgi1579 10 59920928 to 59921368 440 CpG island CpG island 1579
Tssr93499 10 59932799 to 59932819 20 + TSS region transcription start site region 93499
Cpgi1580 10 59942369 to 59942685 316 CpG island CpG island 1580
Ddit4 10 59949675 to 59951770 2095 - protein coding gene DNA-damage-inducible transcript 4
Tssr97682 10 59950216 to 59950228 12 - TSS region transcription start site region 97682
Cpgi1581 10 59950692 to 59952779 2087 CpG island CpG island 1581
Tssr97683 10 59951481 to 59951497 16 - TSS region transcription start site region 97683
Tssr97684 10 59951517 to 59951528 11 - TSS region transcription start site region 97684
Tssr97685 10 59951547 to 59951559 12 - TSS region transcription start site region 97685
Tssr97686 10 59951731 to 59951742 11 - TSS region transcription start site region 97686
Tssr97687 10 59951753 to 59951775 22 - TSS region transcription start site region 97687
Tssr97688 10 59951824 to 59951840 16 - TSS region transcription start site region 97688
Cpgi1582 10 59970070 to 59970347 277 CpG island CpG island 1582
Anapc16 10 59987409 to 60003129 15720 - protein coding gene anaphase promoting complex subunit 16
Tssr93500 10 60002585 to 60002629 44 + TSS region transcription start site region 93500
Cpgi1583 10 60002618 to 60003557 939 CpG island CpG island 1583
Tssr93501 10 60002800 to 60002809 9 + TSS region transcription start site region 93501
Ascc1 10 60002805 to 60099988 97183 + protein coding gene activating signal cointegrator 1 complex subunit 1
Tssr93502 10 60002816 to 60002851 35 + TSS region transcription start site region 93502
Tssr97689 10 60002973 to 60002984 11 - TSS region transcription start site region 97689
Tssr97690 10 60002993 to 60003004 11 - TSS region transcription start site region 97690
Tssr97691 10 60003034 to 60003048 14 - TSS region transcription start site region 97691
Tssr97692 10 60003056 to 60003136 80 - TSS region transcription start site region 97692
Tssr93503 10 60003220 to 60003277 57 + TSS region transcription start site region 93503
Tssr93504 10 60003321 to 60003343 22 + TSS region transcription start site region 93504
Tssr93505 10 60003383 to 60003392 9 + TSS region transcription start site region 93505
Tssr93506 10 60042085 to 60042117 32 + TSS region transcription start site region 93506
Tssr93507 10 60062430 to 60062470 40 + TSS region transcription start site region 93507
Tssr3210 10 60062493 to 60062502 9 + TSS region transcription start site region 3210
Tssr93508 10 60078870 to 60078884 14 + TSS region transcription start site region 93508
Cpgi1584 10 60105808 to 60107878 2070 CpG island CpG island 1584
Tssr93509 10 60105898 to 60105910 12 + TSS region transcription start site region 93509
Tssr93510 10 60105974 to 60105996 22 + TSS region transcription start site region 93510
Tssr93511 10 60106166 to 60106178 12 + TSS region transcription start site region 93511
Tssr93512 10 60106186 to 60106193 7 + TSS region transcription start site region 93512
Tssr93513 10 60106198 to 60106221 23 + TSS region transcription start site region 93513
Tssr93514 10 60106229 to 60106263 34 + TSS region transcription start site region 93514
Spock2 10 60106257 to 60135198 28941 + protein coding gene sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
Tssr93515 10 60106270 to 60106292 22 + TSS region transcription start site region 93515
Tssr93516 10 60106303 to 60106318 15 + TSS region transcription start site region 93516
Tssr93517 10 60106334 to 60106364 30 + TSS region transcription start site region 93517
Tssr93518 10 60106367 to 60106400 33 + TSS region transcription start site region 93518
Tssr93519 10 60106432 to 60106443 11 + TSS region transcription start site region 93519
Tssr93520 10 60106445 to 60106450 5 + TSS region transcription start site region 93520
Tssr93521 10 60106452 to 60106466 14 + TSS region transcription start site region 93521
Tssr93522 10 60115756 to 60115792 36 + TSS region transcription start site region 93522
Tssr93523 10 60126124 to 60126154 30 + TSS region transcription start site region 93523
Mir6906 10 60126776 to 60126833 57 + miRNA gene microRNA 6906
Tssr93524 10 60129675 to 60129681 6 + TSS region transcription start site region 93524
Tssr93525 10 60131959 to 60131970 11 + TSS region transcription start site region 93525
Tssr93526 10 60132893 to 60132915 22 + TSS region transcription start site region 93526
Tssr93527 10 60132921 to 60132961 40 + TSS region transcription start site region 93527
Tssr93528 10 60133618 to 60133647 29 + TSS region transcription start site region 93528
Tssr93529 10 60134777 to 60134810 33 + TSS region transcription start site region 93529
Tssr93530 10 60161625 to 60161637 12 + TSS region transcription start site region 93530
Tssr93531 10 60161662 to 60161669 7 + TSS region transcription start site region 93531
Tssr97693 10 60162372 to 60162382 10 - TSS region transcription start site region 97693
Tssr97694 10 60162384 to 60162398 14 - TSS region transcription start site region 97694
Tssr3211 10 60162412 to 60162415 3 - TSS region transcription start site region 3211
Chst3 10 60181532 to 60219260 37728 - protein coding gene carbohydrate sulfotransferase 3
Cpgi1585 10 60185753 to 60186873 1120 CpG island CpG island 1585
Tssr97695 10 60189711 to 60189715 4 - TSS region transcription start site region 97695
Cpgi1586 10 60191720 to 60192112 392 CpG island CpG island 1586
Gm22117 10 60211185 to 60211251 66 - miRNA gene predicted gene, 22117
Tssr97696 10 60214499 to 60214512 13 - TSS region transcription start site region 97696
Tssr97697 10 60215321 to 60215328 7 - TSS region transcription start site region 97697
Cpgi1587 10 60218248 to 60219707 1459 CpG island CpG island 1587
Tssr93532 10 60218936 to 60218947 11 + TSS region transcription start site region 93532
Tssr93533 10 60219028 to 60219034 6 + TSS region transcription start site region 93533
Tssr97698 10 60219264 to 60219295 31 - TSS region transcription start site region 97698
Tssr97699 10 60219298 to 60219345 47 - TSS region transcription start site region 97699
Tssr97700 10 60220027 to 60220038 11 - TSS region transcription start site region 97700
Tssr97701 10 60220045 to 60220073 28 - TSS region transcription start site region 97701
Gm2038 10 60227989 to 60228859 870 - pseudogene predicted gene 2038
Tssr97702 10 60245178 to 60245219 41 - TSS region transcription start site region 97702
Cpgi1588 10 60257383 to 60257686 303 CpG island CpG island 1588
Tssr93534 10 60261224 to 60261253 29 + TSS region transcription start site region 93534
Tssr93535 10 60266880 to 60266883 3 + TSS region transcription start site region 93535
Tssr93536 10 60266907 to 60266916 9 + TSS region transcription start site region 93536
Tssr93537 10 60266921 to 60266932 11 + TSS region transcription start site region 93537
Tssr93538 10 60266956 to 60266980 24 + TSS region transcription start site region 93538
Tssr93539 10 60266983 to 60267026 43 + TSS region transcription start site region 93539
Tssr93540 10 60267042 to 60267059 17 + TSS region transcription start site region 93540
Tssr93541 10 60267086 to 60267089 3 + TSS region transcription start site region 93541
Tssr93542 10 60267112 to 60267124 12 + TSS region transcription start site region 93542
Tssr93543 10 60267185 to 60267195 10 + TSS region transcription start site region 93543
Tssr93544 10 60267242 to 60267258 16 + TSS region transcription start site region 93544
Cpgi1589 10 60277400 to 60278242 842 CpG island CpG island 1589
Tssr97703 10 60277460 to 60277492 32 - TSS region transcription start site region 97703
Tssr93545 10 60277539 to 60277542 3 + TSS region transcription start site region 93545
Psap 10 60277627 to 60302597 24970 + protein coding gene prosaposin
Tssr93546 10 60277681 to 60277692 11 + TSS region transcription start site region 93546
Tssr93547 10 60277702 to 60277719 17 + TSS region transcription start site region 93547
Tssr93548 10 60277993 to 60278006 13 + TSS region transcription start site region 93548
Tssr93549 10 60278477 to 60278527 50 + TSS region transcription start site region 93549
Tssr93550 10 60278559 to 60278564 5 + TSS region transcription start site region 93550
Tssr93551 10 60278669 to 60278680 11 + TSS region transcription start site region 93551
Tssr93552 10 60279803 to 60279807 4 + TSS region transcription start site region 93552
Tssr93553 10 60284425 to 60284435 10 + TSS region transcription start site region 93553
Tssr93554 10 60284437 to 60284494 57 + TSS region transcription start site region 93554
Tssr93555 10 60291673 to 60291687 14 + TSS region transcription start site region 93555
Tssr93556 10 60291723 to 60291736 13 + TSS region transcription start site region 93556
Tssr93557 10 60292500 to 60292514 14 + TSS region transcription start site region 93557
Tssr97704 10 60292565 to 60292589 24 - TSS region transcription start site region 97704
Tssr93558 10 60292604 to 60292615 11 + TSS region transcription start site region 93558
Tssr93559 10 60292846 to 60292850 4 + TSS region transcription start site region 93559
Tssr93560 10 60293344 to 60293359 15 + TSS region transcription start site region 93560
Tssr93561 10 60293381 to 60293393 12 + TSS region transcription start site region 93561
Tssr93562 10 60293399 to 60293410 11 + TSS region transcription start site region 93562
Tssr93563 10 60293416 to 60293440 24 + TSS region transcription start site region 93563
Tssr93564 10 60294525 to 60294534 9 + TSS region transcription start site region 93564
Tssr93565 10 60294536 to 60294565 29 + TSS region transcription start site region 93565
Tssr93566 10 60294585 to 60294592 7 + TSS region transcription start site region 93566
Tssr97705 10 60294590 to 60294651 61 - TSS region transcription start site region 97705
Tssr93567 10 60294594 to 60294603 9 + TSS region transcription start site region 93567
Tssr93568 10 60294613 to 60294614 1 + TSS region transcription start site region 93568
Tssr93569 10 60294634 to 60294711 77 + TSS region transcription start site region 93569
Tssr97706 10 60294692 to 60294744 52 - TSS region transcription start site region 97706
Tssr93570 10 60294959 to 60294986 27 + TSS region transcription start site region 93570
Tssr97707 10 60294989 to 60294997 8 - TSS region transcription start site region 97707
Tssr93571 10 60295066 to 60295081 15 + TSS region transcription start site region 93571
Tssr97708 10 60295067 to 60295092 25 - TSS region transcription start site region 97708
Tssr93572 10 60295930 to 60295981 51 + TSS region transcription start site region 93572
Tssr93573 10 60296384 to 60296397 13 + TSS region transcription start site region 93573
Tssr93574 10 60296421 to 60296433 12 + TSS region transcription start site region 93574
Tssr93575 10 60296479 to 60296482 3 + TSS region transcription start site region 93575
Tssr93576 10 60296715 to 60296724 9 + TSS region transcription start site region 93576
Tssr93577 10 60296772 to 60296795 23 + TSS region transcription start site region 93577
Tssr93578 10 60296806 to 60296817 11 + TSS region transcription start site region 93578
Tssr93579 10 60296912 to 60296927 15 + TSS region transcription start site region 93579
Tssr93580 10 60297015 to 60297031 16 + TSS region transcription start site region 93580
Tssr93581 10 60297360 to 60297392 32 + TSS region transcription start site region 93581
Tssr93582 10 60297400 to 60297417 17 + TSS region transcription start site region 93582
Tssr93583 10 60297695 to 60297699 4 + TSS region transcription start site region 93583
Tssr93584 10 60298206 to 60298216 10 + TSS region transcription start site region 93584
Tssr93585 10 60299092 to 60299198 106 + TSS region transcription start site region 93585
Tssr97709 10 60299145 to 60299172 27 - TSS region transcription start site region 97709
Tssr97710 10 60299173 to 60299204 31 - TSS region transcription start site region 97710
Tssr97711 10 60299211 to 60299239 28 - TSS region transcription start site region 97711
Tssr93586 10 60299452 to 60299526 74 + TSS region transcription start site region 93586
Tssr97712 10 60299489 to 60299513 24 - TSS region transcription start site region 97712
Tssr93587 10 60299529 to 60299535 6 + TSS region transcription start site region 93587
Tssr93588 10 60299790 to 60299827 37 + TSS region transcription start site region 93588
Tssr97713 10 60299827 to 60299872 45 - TSS region transcription start site region 97713
Tssr93589 10 60299849 to 60299875 26 + TSS region transcription start site region 93589
Tssr3212 10 60299878 to 60299907 29 + TSS region transcription start site region 3212
Tssr93590 10 60299916 to 60299939 23 + TSS region transcription start site region 93590
Tssr93591 10 60299945 to 60299970 25 + TSS region transcription start site region 93591
Tssr97714 10 60299962 to 60299998 36 - TSS region transcription start site region 97714
Tssr93592 10 60299981 to 60300021 40 + TSS region transcription start site region 93592
Tssr97715 10 60300010 to 60300067 57 - TSS region transcription start site region 97715