Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:58808359-59143916

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi1566	10	58812161 to 58814442	2281		CpG island	CpG island 1566
Tssr93462	10	58812337 to 58812352	15	+	TSS region	transcription start site region 93462
Tssr93463	10	58812359 to 58812409	50	+	TSS region	transcription start site region 93463
Tssr93464	10	58812475 to 58812495	20	+	TSS region	transcription start site region 93464
Tssr93465	10	58812566 to 58812600	34	+	TSS region	transcription start site region 93465
Gm9987	10	58812574 to 58813142	568	-	pseudogene	predicted gene 9987
Sh3rf3	10	58813359 to 59138916	325557	+	protein coding gene	SH3 domain containing ring finger 3
Tssr93466	10	58824463 to 58824470	7	+	TSS region	transcription start site region 93466
Tssr93467	10	58827219 to 58827223	4	+	TSS region	transcription start site region 93467
D10Mit60	10	58857595 to 58857699	104		DNA segment	DNA segment, Chr 10, Massachusetts Institute of Technology 60
Ath11	10	58857699 to 6201945	-52655754		QTL	atherosclerosis 11
Gm27672	10	58965543 to 58965746	203	+	miRNA gene	predicted gene, 27672
Tssr93468	10	59016366 to 59016369	3	+	TSS region	transcription start site region 93468
Tssr93469	10	59085765 to 59085769	4	+	TSS region	transcription start site region 93469
Tssr93470	10	59136868 to 59136893	25	+	TSS region	transcription start site region 93470
Tssr3208	10	59136977 to 59136989	12	+	TSS region	transcription start site region 3208
Tssr93471	10	59136997 to 59137013	16	+	TSS region	transcription start site region 93471
Sept10	10	59141627 to 59221847	80220	-	protein coding gene	septin 10