Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:58685543-59245746

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr93461 10 58696725 to 58696754 29 + TSS region transcription start site region 93461
BB019430 10 58696745 to 58704277 7532 + lincRNA gene expressed sequence BB019430
Gm25055 10 58704576 to 58704651 75 - snoRNA gene predicted gene, 25055
Gm17542 10 58713606 to 58718210 4604 - protein coding gene predicted gene, 17542
Gm6494 10 58757370 to 58759471 2101 + pseudogene predicted gene 6494
Cpgi1566 10 58812161 to 58814442 2281 CpG island CpG island 1566
Tssr93462 10 58812337 to 58812352 15 + TSS region transcription start site region 93462
Tssr93463 10 58812359 to 58812409 50 + TSS region transcription start site region 93463
Tssr93464 10 58812475 to 58812495 20 + TSS region transcription start site region 93464
Tssr93465 10 58812566 to 58812600 34 + TSS region transcription start site region 93465
Gm9987 10 58812574 to 58813142 568 - pseudogene predicted gene 9987
Sh3rf3 10 58813359 to 59138916 325557 + protein coding gene SH3 domain containing ring finger 3
Tssr93466 10 58824463 to 58824470 7 + TSS region transcription start site region 93466
Tssr93467 10 58827219 to 58827223 4 + TSS region transcription start site region 93467
D10Mit60 10 58857595 to 58857699 104 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 60
Ath11 10 58857699 to 6201945 -52655754 QTL atherosclerosis 11
Gm27672 10 58965543 to 58965746 203 + miRNA gene predicted gene, 27672
Tssr93468 10 59016366 to 59016369 3 + TSS region transcription start site region 93468
Tssr93469 10 59085765 to 59085769 4 + TSS region transcription start site region 93469
Tssr93470 10 59136868 to 59136893 25 + TSS region transcription start site region 93470
Tssr3208 10 59136977 to 59136989 12 + TSS region transcription start site region 3208
Tssr93471 10 59136997 to 59137013 16 + TSS region transcription start site region 93471
Sept10 10 59141627 to 59221847 80220 - protein coding gene septin 10
Tssr97645 10 59164541 to 59164542 1 - TSS region transcription start site region 97645
Tssr97646 10 59165264 to 59165267 3 - TSS region transcription start site region 97646
Gm23223 10 59195699 to 59195825 126 + snoRNA gene predicted gene, 23223
Cpgi1567 10 59221177 to 59223400 2223 CpG island CpG island 1567
Tssr97647 10 59221469 to 59221518 49 - TSS region transcription start site region 97647
Tssr97648 10 59221726 to 59221744 18 - TSS region transcription start site region 97648
Tssr97649 10 59221757 to 59221803 46 - TSS region transcription start site region 97649
Tssr93472 10 59221878 to 59221929 51 + TSS region transcription start site region 93472
Tssr93473 10 59221945 to 59221960 15 + TSS region transcription start site region 93473
Sowahc 10 59221953 to 59226434 4481 + protein coding gene sosondowah ankyrin repeat domain family member C
Tssr93474 10 59223511 to 59223524 13 + TSS region transcription start site region 93474
Tssr93475 10 59226009 to 59226056 47 + TSS region transcription start site region 93475
Tssr93476 10 59230072 to 59230076 4 + TSS region transcription start site region 93476
Gm36257 10 59243600 to 59256861 13261 + lncRNA gene predicted gene, 36257