Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:58228540-58418607

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm10807 10 58227857 to 58228651 794 - pseudogene predicted gene 10807
Duxf3 10 58229979 to 58232675 2696 - protein coding gene double homeobox family member 3
Cpgi1558 10 58231892 to 58232203 311 CpG island CpG island 1558
Gm4981 10 58234848 to 58236660 1812 - protein coding gene predicted gene 4981
Cpgi1559 10 58236742 to 58236920 178 CpG island CpG island 1559
Gm9919 10 58239034 to 58252702 13668 - unclassified gene predicted gene 9919
Gm19459 10 58239608 to 58240661 1053 - pseudogene predicted gene, 19459
Cpgi1560 10 58255248 to 58255906 658 CpG island CpG island 1560
Tssr93422 10 58255465 to 58255537 72 + TSS region transcription start site region 93422
Gcc2 10 58255497 to 58305599 50102 + protein coding gene GRIP and coiled-coil domain containing 2
2610202C22Rik 10 58284428 to 58285176 748 unclassified gene RIKEN cDNA 2610202C22 gene
Gm40668 10 58307973 to 58312852 4879 + lncRNA gene predicted gene, 40668
Cpgi1561 10 58323099 to 58324073 974 CpG island CpG island 1561
Lims1 10 58323466 to 58424691 101225 + protein coding gene LIM and senescent cell antigen-like domains 1
Tssr93423 10 58323479 to 58323499 20 + TSS region transcription start site region 93423
Tssr93424 10 58323526 to 58323533 7 + TSS region transcription start site region 93424
Tssr93425 10 58323540 to 58323607 67 + TSS region transcription start site region 93425
Tssr93426 10 58324685 to 58324688 3 + TSS region transcription start site region 93426
A130099P19Rik 10 58328684 to 58332951 4267 unclassified gene RIKEN cDNA A130099P19 gene
Tssr93427 10 58328705 to 58328709 4 + TSS region transcription start site region 93427
Tssr93428 10 58332819 to 58332834 15 + TSS region transcription start site region 93428
Gm23058 10 58349498 to 58349604 106 - snRNA gene predicted gene, 23058
Tssr93429 10 58351892 to 58351943 51 + TSS region transcription start site region 93429
Tssr93430 10 58351944 to 58351971 27 + TSS region transcription start site region 93430
Tssr93431 10 58351987 to 58351990 3 + TSS region transcription start site region 93431
Tssr93432 10 58352102 to 58352120 18 + TSS region transcription start site region 93432
Tssr93433 10 58359880 to 58359885 5 + TSS region transcription start site region 93433
Tssr93434 10 58371409 to 58371499 90 + TSS region transcription start site region 93434
Tssr3206 10 58371505 to 58371536 31 + TSS region transcription start site region 3206
Tssr93435 10 58371593 to 58371604 11 + TSS region transcription start site region 93435
Tssr93436 10 58371610 to 58371627 17 + TSS region transcription start site region 93436
Cpgi1562 10 58371616 to 58371786 170 CpG island CpG island 1562
Tssr93437 10 58375146 to 58375165 19 + TSS region transcription start site region 93437
Tssr93438 10 58391467 to 58391502 35 + TSS region transcription start site region 93438
Tssr93439 10 58394361 to 58394380 19 + TSS region transcription start site region 93439
Tssr93440 10 58394381 to 58394395 14 + TSS region transcription start site region 93440
Tssr93441 10 58400509 to 58400515 6 + TSS region transcription start site region 93441
Ltgq1 10 58401504 to 58401504 0 QTL liver triglyceride QTL 1
Tssr93442 10 58407673 to 58407708 35 + TSS region transcription start site region 93442
Tssr93443 10 58418420 to 58418447 27 + TSS region transcription start site region 93443