Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:56397553-57470234

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm36460 10 56395138 to 56399289 4151 + lncRNA gene predicted gene, 36460
Gm36517 10 56417339 to 56418001 662 - lncRNA gene predicted gene, 36517
Gm36595 10 56431507 to 56475415 43908 + lincRNA gene predicted gene, 36595
4930452L12Rik 10 56436354 to 56437603 1249 - lincRNA gene RIKEN cDNA 4930452L12 gene
Gm9118 10 56497341 to 56498094 753 + pseudogene predicted gene 9118
Tssr93374 10 56504495 to 56504520 25 + TSS region transcription start site region 93374
1700066D14Rik 10 56504500 to 56505286 786 unclassified gene RIKEN cDNA 1700066D14 gene
Tssr93375 10 56504521 to 56504535 14 + TSS region transcription start site region 93375
Tssr93376 10 56504550 to 56504559 9 + TSS region transcription start site region 93376
Cpgi1551 10 56504550 to 56504873 323 CpG island CpG island 1551
Tssr93377 10 56556087 to 56556091 4 + TSS region transcription start site region 93377
Tssr93378 10 56599427 to 56599438 11 + TSS region transcription start site region 93378
Cfq11 10 56604060 to 61105062 4501002 QTL conditioned fear QTL 11
Tssr93379 10 56655925 to 56655938 13 + TSS region transcription start site region 93379
Gm9795 10 56656194 to 56656886 692 + pseudogene predicted pseudogene 9795
D10Mit59 10 56791275 to 56791437 162 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 59
Tssr93380 10 56795680 to 56795690 10 + TSS region transcription start site region 93380
Gm31931 10 56829086 to 56829307 221 - pseudogene predicted gene, 31931
Gm48053 10 56909674 to 56914765 5091 - lincRNA gene predicted gene, 48053
Tssr97623 10 56914532 to 56914575 43 - TSS region transcription start site region 97623
Gm36769 10 56932553 to 56935234 2681 - lncRNA gene predicted gene, 36769
Gm36827 10 56970833 to 56982231 11398 - lincRNA gene predicted gene, 36827
Tssr97624 10 56982098 to 56982103 5 - TSS region transcription start site region 97624
Tssr97625 10 56982130 to 56982137 7 - TSS region transcription start site region 97625
Tssr97626 10 56982158 to 56982168 10 - TSS region transcription start site region 97626
Tssr97627 10 56982179 to 56982203 24 - TSS region transcription start site region 97627
Gm40652 10 57117222 to 57157621 40399 + lincRNA gene predicted gene, 40652
D10Mit127 10 57135859 to 57136007 148 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 127
Gm24285 10 57174030 to 57174129 99 + snRNA gene predicted gene, 24285
Gm48055 10 57266499 to 57266754 255 - pseudogene predicted gene, 48055
Gm7001 10 57290889 to 57292353 1464 + pseudogene predicted gene 7001
Gm9129 10 57386423 to 57391153 4730 + pseudogene predicted gene 9129
Gm19256 10 57413481 to 57413711 230 - pseudogene predicted gene, 19256