Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:54104362-56144788

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr93347 10 54118056 to 54118071 15 + TSS region transcription start site region 93347
Tssr93348 10 54118073 to 54118084 11 + TSS region transcription start site region 93348
Tssr93349 10 54118114 to 54118126 12 + TSS region transcription start site region 93349
Tssr93350 10 54118133 to 54118151 18 + TSS region transcription start site region 93350
Tssr3193 10 54119447 to 54119464 17 + TSS region transcription start site region 3193
Tssr3194 10 54160704 to 54160708 4 - TSS region transcription start site region 3194
Gm40651 10 54165171 to 54228819 63648 + lncRNA gene predicted gene, 40651
Gm47967 10 54211734 to 54212823 1089 + pseudogene predicted gene, 47967
Gm47968 10 54212871 to 54216723 3852 + pseudogene predicted gene, 47968
Gm26177 10 54311225 to 54311331 106 - snRNA gene predicted gene, 26177
D10Mit90 10 54341289 to 54341514 225 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 90
Gm36335 10 54343992 to 54365223 21231 - lncRNA gene predicted gene, 36335
D10Nds3 10 54384381 to 54384470 89 DNA segment DNA segment, Chr 10, Nuffield Department of Surgery 3
Tssr93351 10 54579288 to 54579311 23 + TSS region transcription start site region 93351
Gm47970 10 54670792 to 54671704 912 - pseudogene predicted gene, 47970
D10Ertd494e 10 54678920 to 54679138 218 DNA segment DNA segment, Chr 10, ERATO Doi 494, expressed
Gm25602 10 54712976 to 54713037 61 - snRNA gene predicted gene, 25602
D10Mit171.2 10 54974411 to 54974539 128 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 171.2
D10Mit171 10 54974515 to 54974663 148 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 171
Gm31849 10 55057202 to 55057570 368 + pseudogene predicted gene, 31849
Gm46190 10 55124362 to 55124788 426 + pseudogene predicted gene, 46190
Tssr97612 10 55215179 to 55215181 2 - TSS region transcription start site region 97612
Gm3577 10 55550980 to 55571110 20130 protein coding gene predicted gene 3577
Tssr97613 10 55563560 to 55563563 3 - TSS region transcription start site region 97613
D10Mit110 10 55789660 to 55789808 148 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 110
Tssr97614 10 55992377 to 55992380 3 - TSS region transcription start site region 97614
Tbc1d32 10 56014293 to 56228689 214396 - protein coding gene TBC1 domain family, member 32
1700001I21Rik 10 56083829 to 56106375 22546 unclassified gene RIKEN cDNA 1700001I21 gene
Tssr93352 10 56083855 to 56083864 9 + TSS region transcription start site region 93352
Gm29794 10 56100635 to 56102003 1368 - pseudogene predicted gene, 29794
Tssr93353 10 56106883 to 56106937 54 + TSS region transcription start site region 93353
Msl3l2 10 56106917 to 56116880 9963 + protein coding gene MSL3 like 2
Tssr93354 10 56106945 to 56106959 14 + TSS region transcription start site region 93354
Cpgi1547 10 56114921 to 56115962 1041 CpG island CpG island 1547
Tssr93355 10 56114950 to 56114961 11 + TSS region transcription start site region 93355
Tssr93356 10 56115322 to 56115384 62 + TSS region transcription start site region 93356
Tssr93357 10 56115392 to 56115423 31 + TSS region transcription start site region 93357
Tssr97615 10 56115532 to 56115538 6 - TSS region transcription start site region 97615
Tssr97616 10 56115539 to 56115547 8 - TSS region transcription start site region 97616
Tssr97617 10 56115553 to 56115565 12 - TSS region transcription start site region 97617
D10Ertd533e 10 56118598 to 56118821 223 DNA segment DNA segment, Chr 10, ERATO Doi 533, expressed
Tssr97618 10 56132608 to 56132612 4 - TSS region transcription start site region 97618