MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 10:54076289-54606514

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Man1a	10	53904785 to 54076547	171762	-	protein coding gene	mannosidase 1, alpha
Cpgi1546	10	54074137 to 54076352	2215		CpG island	CpG island 1546
Gm16998	10	54075922 to 54081081	5159	+	bidirectional promoter lncRNA gene	predicted gene, 16998
Tssr97611	10	54076581 to 54076620	39	-	TSS region	transcription start site region 97611
Tssr93347	10	54118056 to 54118071	15	+	TSS region	transcription start site region 93347
Tssr93348	10	54118073 to 54118084	11	+	TSS region	transcription start site region 93348
Tssr93349	10	54118114 to 54118126	12	+	TSS region	transcription start site region 93349
Tssr93350	10	54118133 to 54118151	18	+	TSS region	transcription start site region 93350
Tssr3193	10	54119447 to 54119464	17	+	TSS region	transcription start site region 3193
Tssr3194	10	54160704 to 54160708	4	-	TSS region	transcription start site region 3194
Gm40651	10	54165171 to 54228819	63648	+	lncRNA gene	predicted gene, 40651
Gm47967	10	54211734 to 54212823	1089	+	pseudogene	predicted gene, 47967
Gm47968	10	54212871 to 54216723	3852	+	pseudogene	predicted gene, 47968
Gm26177	10	54311225 to 54311331	106	-	snRNA gene	predicted gene, 26177
D10Mit90	10	54341289 to 54341514	225		DNA segment	DNA segment, Chr 10, Massachusetts Institute of Technology 90
Gm36335	10	54343992 to 54365223	21231	-	lncRNA gene	predicted gene, 36335
D10Nds3	10	54384381 to 54384470	89		DNA segment	DNA segment, Chr 10, Nuffield Department of Surgery 3
Tssr93351	10	54579288 to 54579311	23	+	TSS region	transcription start site region 93351