Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:53603145-53781123

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Xiaf3 10 11642896 to 53772211 42129315 heritable phenotypic marker X inactivation autosomal factor 3
fsq 10 43656132 to 53772211 10116079 heritable phenotypic marker flying squirrel
Mcm9 10 53536315 to 53630439 94124 - protein coding gene minichromosome maintenance 9 homologous recombination repair factor
Del(10Mcm9-Asf1a)1Byg 10 53596600 to 53620013 23413 chromosomal deletion gene trap XE518 induced deletion 1, BayGenomics
Asf1a 10 53596961 to 53609225 12264 + protein coding gene anti-silencing function 1A histone chaperone
4930466K18Rik 10 53614369 to 53615274 905 + unclassified gene RIKEN cDNA 4930466K18 gene
Cpgi1544 10 53629275 to 53630321 1046 CpG island CpG island 1544
Tssr97593 10 53629942 to 53629981 39 - TSS region transcription start site region 97593
Tssr97594 10 53629987 to 53630022 35 - TSS region transcription start site region 97594
Tssr97595 10 53631689 to 53631690 1 - TSS region transcription start site region 97595
Fam184a 10 53633145 to 53751123 117978 - protein coding gene family with sequence similarity 184, member A
B930046M08Rik 10 53635456 to 53660216 24760 unclassified non-coding RNA gene RIKEN cDNA B930046M08 gene
Tssr93342 10 53635461 to 53635476 15 + TSS region transcription start site region 93342
Cpgi1545 10 53750412 to 53751662 1250 CpG island CpG island 1545
Tssr97596 10 53751093 to 53751164 71 - TSS region transcription start site region 97596
Tssr97597 10 53751178 to 53751191 13 - TSS region transcription start site region 97597
Tssr97598 10 53751194 to 53751266 72 - TSS region transcription start site region 97598
nmf347 10 53772094 to 67012618 13240524 heritable phenotypic marker neuroscience mutagenesis facility, 347
nmf172 10 53772094 to 67012618 13240524 heritable phenotypic marker neuroscience mutagenesis facility, 172
D10Mit138 10 53772094 to 53772211 117 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 138