Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:53359964-53590469

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cep85l 10 53276799 to 53379851 103052 - protein coding gene centrosomal protein 85-like
Tssr97585 10 53361003 to 53361006 3 - TSS region transcription start site region 97585
Tssr97586 10 53371821 to 53371823 2 - TSS region transcription start site region 97586
Tssr97587 10 53376130 to 53376164 34 - TSS region transcription start site region 97587
Cpgi1542 10 53379112 to 53380144 1032 CpG island CpG island 1542
Gm47641 10 53379452 to 53381386 1934 + unclassified gene predicted gene, 47641
Tssr97588 10 53379816 to 53379858 42 - TSS region transcription start site region 97588
Tssr97589 10 53379864 to 53379899 35 - TSS region transcription start site region 97589
Gm46225 10 53380375 to 53398748 18373 - lncRNA gene predicted gene, 46225
Tssr97590 10 53398703 to 53398728 25 - TSS region transcription start site region 97590
Tssr97591 10 53398745 to 53398756 11 - TSS region transcription start site region 97591
Gm36229 10 53409882 to 53424272 14390 + lincRNA gene predicted gene, 36229
D10Mit219 10 53440706 to 53440830 124 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 219
Tssr93327 10 53467940 to 53467946 6 + TSS region transcription start site region 93327
Tssr93328 10 53471523 to 53471529 6 + TSS region transcription start site region 93328
Tmem229b-ps 10 53474964 to 53475469 505 + pseudogene transmembrane protein 229B, pseudogene
Gm36280 10 53488240 to 53510407 22167 + lncRNA gene predicted gene, 36280
Tssr93329 10 53488270 to 53488278 8 + TSS region transcription start site region 93329
Gm20597 10 53498443 to 53518989 20546 - lincRNA gene predicted gene, 20597
Gm40650 10 53511143 to 53514526 3383 + lincRNA gene predicted gene, 40650
Tssr97592 10 53519700 to 53519718 18 - TSS region transcription start site region 97592
Tssr93330 10 53525975 to 53525980 5 + TSS region transcription start site region 93330
Gm47722 10 53529657 to 53530185 528 - pseudogene predicted gene, 47722
Mcm9 10 53536315 to 53630439 94124 - protein coding gene minichromosome maintenance 9 homologous recombination repair factor
Gm47738 10 53569669 to 53571582 1913 + antisense lncRNA gene predicted gene, 47738
Gm47739 10 53570625 to 53575756 5131 - sense intronic lncRNA gene predicted gene, 47739
Tssr93331 10 53580425 to 53580430 5 + TSS region transcription start site region 93331