MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 10:52540496-52840554

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Zfa-ps	10	52542320 to 52545739	3419	-	pseudogene	zinc finger protein, autosomal, pseudogene
Cpgi1537	10	52545646 to 52545958	312		CpG island	CpG island 1537
Cpgi1538	10	52593972 to 52594229	257		CpG island	CpG island 1538
Gm36065	10	52594442 to 52596645	2203	+	lincRNA gene	predicted gene, 36065
Tssr93308	10	52686844 to 52686846	2	+	TSS region	transcription start site region 93308
Cpgi1539	10	52690245 to 52691659	1414		CpG island	CpG island 1539
Tssr93309	10	52690496 to 52690554	58	+	TSS region	transcription start site region 93309
Slc35f1	10	52690533 to 53111622	421089	+	protein coding gene	solute carrier family 35, member F1
Tssr93310	10	52690574 to 52690586	12	+	TSS region	transcription start site region 93310
Tssr93311	10	52690595 to 52690602	7	+	TSS region	transcription start site region 93311
Gm47624	10	52693838 to 52697673	3835	+	unclassified gene	predicted gene, 47624
Cpgi1540	10	52704614 to 52704987	373		CpG island	CpG island 1540
Tssr93312	10	52760935 to 52760951	16	+	TSS region	transcription start site region 93312
Gm36123	10	52768755 to 52772003	3248	-	lncRNA gene	predicted gene, 36123
Tssr93313	10	52800218 to 52800221	3	+	TSS region	transcription start site region 93313
Gm47623	10	52801493 to 52801700	207	+	unclassified gene	predicted gene, 47623
Gm40647	10	52804356 to 52815822	11466	+	lncRNA gene	predicted gene, 40647
Tssr93314	10	52823763 to 52823767	4	+	TSS region	transcription start site region 93314
Gm47621	10	52824305 to 52826842	2537	+	unclassified gene	predicted gene, 47621