MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 10:52234404-52405047

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Dcbld1	10	52233619 to 52321378	87759	+	protein coding gene	discoidin, CUB and LCCL domain containing 1
Tssr93297	10	52276798 to 52276842	44	+	TSS region	transcription start site region 93297
Cpgi1534	10	52319404 to 52320047	643		CpG island	CpG island 1534
Tssr93298	10	52319873 to 52319884	11	+	TSS region	transcription start site region 93298
Gopc	10	52337024 to 52382124	45100	-	protein coding gene	golgi associated PDZ and coiled-coil motif containing
Gm6627	10	52341272 to 52343657	2385	-	pseudogene	predicted gene 6627
Tssr97575	10	52343659 to 52343674	15	-	TSS region	transcription start site region 97575
Gm26741	10	52358767 to 52358853	86	+	protein coding gene	predicted gene, 26741
Gm47580	10	52379196 to 52381226	2030	-	unclassified gene	predicted gene, 47580
Cpgi1535	10	52381338 to 52382531	1193		CpG island	CpG island 1535
Tssr93299	10	52381493 to 52381499	6	+	TSS region	transcription start site region 93299
Tssr97576	10	52381921 to 52381940	19	-	TSS region	transcription start site region 97576
Tssr97577	10	52381956 to 52381978	22	-	TSS region	transcription start site region 97577
Tssr97578	10	52382074 to 52382142	68	-	TSS region	transcription start site region 97578
Rps19-ps10	10	52384659 to 52385093	434	-	pseudogene	ribosomal protein S19, pseudogene 10
Tssr93300	10	52388963 to 52388977	14	+	TSS region	transcription start site region 93300
Nepn	10	52388972 to 52404625	15653	+	protein coding gene	nephrocan
Tssr93301	10	52391606 to 52391610	4	+	TSS region	transcription start site region 93301