Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:51802337-52542460

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm23906 10 51888625 to 51888752 127 + snoRNA gene predicted gene, 23906
D10Mit89 10 51961080 to 51961197 117 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 89
Gm40646 10 51965300 to 51970400 5100 - lincRNA gene predicted gene, 40646
Tssr97569 10 51970261 to 51970268 7 - TSS region transcription start site region 97569
Gm47626 10 51986342 to 51989579 3237 - pseudogene predicted gene, 47626
Cpgi1531 10 52022127 to 52023092 965 CpG island CpG island 1531
Vgll2 10 52022502 to 52028471 5969 + protein coding gene vestigial like family member 2
Tssr93295 10 52022520 to 52022534 14 + TSS region transcription start site region 93295
Cpgi1532 10 52027311 to 52028129 818 CpG island CpG island 1532
Gm24084 10 52032251 to 52032387 136 + miRNA gene predicted gene, 24084
Ros1 10 52045721 to 52195244 149523 - protein coding gene Ros1 proto-oncogene
D10Mit56 10 52088104 to 52088238 134 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 56
Gm20630 10 52119319 to 52119869 550 - pseudogene predicted gene 20630
D10Mit256 10 52172337 to 52172460 123 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 256
Gm18513 10 52189248 to 52189807 559 + pseudogene predicted gene, 18513
Tssr3192 10 52193292 to 52193294 2 + TSS region transcription start site region 3192
Tssr97570 10 52194975 to 52194990 15 - TSS region transcription start site region 97570
Tssr97571 10 52195026 to 52195083 57 - TSS region transcription start site region 97571
Tssr97572 10 52195276 to 52195288 12 - TSS region transcription start site region 97572
Tssr97573 10 52195312 to 52195332 20 - TSS region transcription start site region 97573
Tssr97574 10 52195357 to 52195377 20 - TSS region transcription start site region 97574
Cpgi1533 10 52233344 to 52234358 1014 CpG island CpG island 1533
Tssr93296 10 52233612 to 52233672 60 + TSS region transcription start site region 93296
Dcbld1 10 52233619 to 52321378 87759 + protein coding gene discoidin, CUB and LCCL domain containing 1
Tssr93297 10 52276798 to 52276842 44 + TSS region transcription start site region 93297
Cpgi1534 10 52319404 to 52320047 643 CpG island CpG island 1534
Tssr93298 10 52319873 to 52319884 11 + TSS region transcription start site region 93298
Gopc 10 52337024 to 52382124 45100 - protein coding gene golgi associated PDZ and coiled-coil motif containing
Gm6627 10 52341272 to 52343657 2385 - pseudogene predicted gene 6627
Tssr97575 10 52343659 to 52343674 15 - TSS region transcription start site region 97575
Gm26741 10 52358767 to 52358853 86 + protein coding gene predicted gene, 26741
Gm47580 10 52379196 to 52381226 2030 - unclassified gene predicted gene, 47580
Cpgi1535 10 52381338 to 52382531 1193 CpG island CpG island 1535
Tssr93299 10 52381493 to 52381499 6 + TSS region transcription start site region 93299
Tssr97576 10 52381921 to 52381940 19 - TSS region transcription start site region 97576
Tssr97577 10 52381956 to 52381978 22 - TSS region transcription start site region 97577
Tssr97578 10 52382074 to 52382142 68 - TSS region transcription start site region 97578
Rps19-ps10 10 52384659 to 52385093 434 - pseudogene ribosomal protein S19, pseudogene 10
Tssr93300 10 52388963 to 52388977 14 + TSS region transcription start site region 93300
Nepn 10 52388972 to 52404625 15653 + protein coding gene nephrocan
Tssr93301 10 52391606 to 52391610 4 + TSS region transcription start site region 93301
Cpgi1536 10 52417130 to 52418398 1268 CpG island CpG island 1536
Tssr93302 10 52417532 to 52417580 48 + TSS region transcription start site region 93302
Nus1 10 52417547 to 52440183 22636 + protein coding gene NUS1 dehydrodolichyl diphosphate synthase subunit
Tssr93303 10 52417589 to 52417611 22 + TSS region transcription start site region 93303
Tssr93304 10 52417701 to 52417712 11 + TSS region transcription start site region 93304
Tssr93305 10 52417871 to 52417918 47 + TSS region transcription start site region 93305
Tssr93306 10 52418031 to 52418042 11 + TSS region transcription start site region 93306
Tssr97579 10 52419482 to 52419519 37 - TSS region transcription start site region 97579
Tssr93307 10 52423761 to 52423766 5 + TSS region transcription start site region 93307
Gm47608 10 52450369 to 52452515 2146 + unclassified gene predicted gene, 47608
Gm47607 10 52451409 to 52453591 2182 - unclassified gene predicted gene, 47607
Gm47609 10 52514399 to 52514777 378 - pseudogene predicted gene, 47609
Gm47610 10 52518293 to 52518482 189 - pseudogene predicted gene, 47610
Gm47611 10 52523022 to 52526859 3837 + pseudogene predicted gene, 47611
Gm47612 10 52528519 to 52529023 504 + pseudogene predicted gene, 47612
Zfa-ps 10 52542320 to 52545739 3419 - pseudogene zinc finger protein, autosomal, pseudogene