Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:51502582-51853078

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm48484 10 51511874 to 51512162 288 + pseudogene predicted gene, 48484
D10Mit58 10 51520004 to 51520110 106 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 58
Gm40645 10 51520783 to 51527404 6621 - antisense lncRNA gene predicted gene, 40645
Tssr97561 10 51522432 to 51522458 26 - TSS region transcription start site region 97561
Tssr97562 10 51526220 to 51526237 17 - TSS region transcription start site region 97562
Tssr93290 10 51526329 to 51526360 31 + TSS region transcription start site region 93290
Tssr93291 10 51526401 to 51526439 38 + TSS region transcription start site region 93291
Tssr97563 10 51527316 to 51527323 7 - TSS region transcription start site region 97563
Gm46224 10 51527757 to 51531161 3404 + lincRNA gene predicted gene, 46224
Tssr93292 10 51528013 to 51528071 58 + TSS region transcription start site region 93292
Tssr93293 10 51533837 to 51533849 12 + TSS region transcription start site region 93293
Gm48786 10 51543035 to 51546848 3813 + pseudogene predicted gene, 48786
Gm48787 10 51551069 to 51551447 378 - pseudogene predicted gene, 48787
Gm48788 10 51568949 to 51574134 5185 + pseudogene predicted gene, 48788
Fam162b 10 51585416 to 51590517 5101 - protein coding gene family with sequence similarity 162, member B
Cpgi1529 10 51590282 to 51590505 223 CpG island CpG island 1529
Tssr97564 10 51590439 to 51590464 25 - TSS region transcription start site region 97564
Tssr97565 10 51590473 to 51590497 24 - TSS region transcription start site region 97565
Tssr3191 10 51597373 to 51597390 17 - TSS region transcription start site region 3191
Gprc6a 10 51614823 to 51631458 16635 - protein coding gene G protein-coupled receptor, family C, group 6, member A
D10Mit141 10 51617304 to 51617452 148 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 141
Cia8 10 51617304 to 82655287 31037983 QTL collagen induced arthritis QTL 8
1700042O05Rik 10 51666989 to 51675831 8842 + lincRNA gene RIKEN cDNA 1700042O05 gene
Cpgi1530 10 51677582 to 51678078 496 CpG island CpG island 1530
Rfx6 10 51677760 to 51730429 52669 + protein coding gene regulatory factor X, 6
Tssr93294 10 51677766 to 51677789 23 + TSS region transcription start site region 93294
4933411G06Rik 10 51756174 to 51757194 1020 - lincRNA gene RIKEN cDNA 4933411G06 gene
Tssr97566 10 51757158 to 51757170 12 - TSS region transcription start site region 97566
Tssr97567 10 51757189 to 51757201 12 - TSS region transcription start site region 97567
Gm47613 10 51757257 to 51761015 3758 + lincRNA gene predicted gene, 47613
Gm47614 10 51781993 to 51786941 4948 - lincRNA gene predicted gene, 47614
Tssr97568 10 51786940 to 51786968 28 - TSS region transcription start site region 97568