Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:50664361-51274365

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ascc3 10 50592669 to 50851202 258533 + protein coding gene activating signal cointegrator 1 complex subunit 3
Tssr93214 10 50666286 to 50666291 5 + TSS region transcription start site region 93214
Gm48332 10 50696472 to 50696841 369 + unclassified gene predicted gene, 48332
D10Mit57 10 50700861 to 50701003 142 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 57
Tssr93215 10 50727185 to 50727199 14 + TSS region transcription start site region 93215
Tssr93216 10 50729911 to 50729939 28 + TSS region transcription start site region 93216
D10Wsu159e 10 50749915 to 50750140 225 DNA segment DNA segment, Chr 10, Wayne State University 159, expressed
Gm18120 10 50758184 to 50758694 510 + pseudogene predicted gene, 18120
Tssr93217 10 50773364 to 50773372 8 + TSS region transcription start site region 93217
Tssr93218 10 50777203 to 50777226 23 + TSS region transcription start site region 93218
Tssr93219 10 50779483 to 50779492 9 + TSS region transcription start site region 93219
D10Mit147 10 50788802 to 50788902 100 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 147
Tssr93220 10 50792268 to 50792283 15 + TSS region transcription start site region 93220
Tssr93221 10 50797989 to 50798005 16 + TSS region transcription start site region 93221
Tssr93222 10 50803781 to 50803793 12 + TSS region transcription start site region 93222
Gm48333 10 50813725 to 50813990 265 + pseudogene predicted gene, 48333
Tssr93223 10 50819582 to 50819599 17 + TSS region transcription start site region 93223
Gm23883 10 50866075 to 50866364 289 - unclassified non-coding RNA gene predicted gene, 23883
A230054N11Rik 10 50889157 to 50894534 5377 - lncRNA gene RIKEN cDNA A230054N11 gene
Cpgi1524 10 50894182 to 50895439 1257 CpG island CpG island 1524
Tssr97551 10 50894494 to 50894516 22 - TSS region transcription start site region 97551
Tssr93224 10 50894740 to 50894762 22 + TSS region transcription start site region 93224
Sim1 10 50894754 to 50989152 94398 + protein coding gene single-minded family bHLH transcription factor 1
Cpgi1525 10 50900671 to 50901409 738 CpG island CpG island 1525
Cpgi1526 10 50902922 to 50903666 744 CpG island CpG island 1526
Tssr93225 10 50903089 to 50903099 10 + TSS region transcription start site region 93225
Cpgi1527 10 50904403 to 50904900 497 CpG island CpG island 1527
Tssr93226 10 50907398 to 50907399 1 + TSS region transcription start site region 93226
Cpgi1528 10 50910443 to 50910788 345 CpG island CpG island 1528
Tssr93227 10 50969361 to 50969365 4 + TSS region transcription start site region 93227
Gm35917 10 51175871 to 51187091 11220 - lncRNA gene predicted gene, 35917
Gm26257 10 51182299 to 51182405 106 + snRNA gene predicted gene, 26257
Gm5040 10 51238829 to 51239628 799 + pseudogene predicted gene 5040