Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:50382670-50802739

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm46223 10 50422134 to 50422808 674 - protein coding gene predicted gene, 46223
Gm40643 10 50422864 to 50423861 997 - lncRNA gene predicted gene, 40643
Gm48274 10 50424086 to 50424340 254 + unclassified gene predicted gene, 48274
Gm48275 10 50425044 to 50425330 286 - lincRNA gene predicted gene, 48275
Gm6991 10 50480996 to 50482169 1173 + pseudogene predicted gene 6991
Tssr97546 10 50520945 to 50520959 14 - TSS region transcription start site region 97546
Gm46199 10 50522287 to 50523270 983 - pseudogene predicted gene, 46199
Tssr97547 10 50589579 to 50589586 7 - TSS region transcription start site region 97547
Tssr97548 10 50589600 to 50589623 23 - TSS region transcription start site region 97548
Cpgi1523 10 50592340 to 50593255 915 CpG island CpG island 1523
Tssr97549 10 50592360 to 50592389 29 - TSS region transcription start site region 97549
Tssr97550 10 50592548 to 50592558 10 - TSS region transcription start site region 97550
Ascc3 10 50592669 to 50851202 258533 + protein coding gene activating signal cointegrator 1 complex subunit 3
Tssr93211 10 50592670 to 50592739 69 + TSS region transcription start site region 93211
Tssr93212 10 50620800 to 50620807 7 + TSS region transcription start site region 93212
Tssr93213 10 50662553 to 50662562 9 + TSS region transcription start site region 93213
Tssr93214 10 50666286 to 50666291 5 + TSS region transcription start site region 93214
Gm48332 10 50696472 to 50696841 369 + unclassified gene predicted gene, 48332
D10Mit57 10 50700861 to 50701003 142 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 57
Tssr93215 10 50727185 to 50727199 14 + TSS region transcription start site region 93215
Tssr93216 10 50729911 to 50729939 28 + TSS region transcription start site region 93216
D10Wsu159e 10 50749915 to 50750140 225 DNA segment DNA segment, Chr 10, Wayne State University 159, expressed
Gm18120 10 50758184 to 50758694 510 + pseudogene predicted gene, 18120
Tssr93217 10 50773364 to 50773372 8 + TSS region transcription start site region 93217
Tssr93218 10 50777203 to 50777226 23 + TSS region transcription start site region 93218
Tssr93219 10 50779483 to 50779492 9 + TSS region transcription start site region 93219
D10Mit147 10 50788802 to 50788902 100 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 147
Tssr93220 10 50792268 to 50792283 15 + TSS region transcription start site region 93220
Tssr93221 10 50797989 to 50798005 16 + TSS region transcription start site region 93221