Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:4923496-5129002

13 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Esr1	10	4611989 to 5005633	393644	+	protein coding gene	estrogen receptor 1 (alpha)
Tssr92278	10	4959586 to 4959591	5	+	TSS region	transcription start site region 92278
Tssr92279	10	4981518 to 4981534	16	+	TSS region	transcription start site region 92279
Tssr92280	10	5003430 to 5003435	5	+	TSS region	transcription start site region 92280
Syne1	10	5020192 to 5550692	530500	-	protein coding gene	spectrin repeat containing, nuclear envelope 1
5330421C15Rik	10	5023496 to 5029002	5506		unclassified gene	RIKEN cDNA 5330421C15 gene
Tssr3117	10	5032271 to 5032276	5	+	TSS region	transcription start site region 3117
Gm25694	10	5036175 to 5036456	281	-	ribozyme gene	predicted gene, 25694
Tssr96516	10	5068914 to 5068958	44	-	TSS region	transcription start site region 96516
Tssr96517	10	5069044 to 5069079	35	-	TSS region	transcription start site region 96517
Gm10097	10	5069192 to 5071975	2783	+	protein coding gene	predicted gene 10097
Gm48836	10	5091006 to 5091286	280	-	pseudogene	predicted gene, 48836
Wght8	10	44000000 to 5000000	-39000000		QTL	weight 8