Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:48894842-49989255

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm47380 10 48910116 to 48910533 417 + unclassified gene predicted gene, 47380
Grik2 10 49094842 to 49789255 694413 - protein coding gene glutamate receptor, ionotropic, kainate 2 (beta 2)
Gm47017 10 49188994 to 49192365 3371 - unclassified gene predicted gene, 47017
Gm18512 10 49199715 to 49200261 546 + pseudogene predicted gene, 18512
Tssr97535 10 49218373 to 49218376 3 - TSS region transcription start site region 97535
Tssr97536 10 49218974 to 49218978 4 - TSS region transcription start site region 97536
Gm26543 10 49219422 to 49225653 6231 - sense intronic lncRNA gene predicted gene, 26543
Tssr97537 10 49231890 to 49231897 7 - TSS region transcription start site region 97537
Gm47018 10 49236915 to 49237861 946 - sense intronic lncRNA gene predicted gene, 47018
Tssr97538 10 49272808 to 49272833 25 - TSS region transcription start site region 97538
Tssr97539 10 49364425 to 49364450 25 - TSS region transcription start site region 97539
Gm47023 10 49482000 to 49484479 2479 - unclassified gene predicted gene, 47023
Tssr97540 10 49534098 to 49534104 6 - TSS region transcription start site region 97540
Gm47016 10 49661647 to 49663273 1626 - unclassified gene predicted gene, 47016
Gm47022 10 49700363 to 49702834 2471 - unclassified gene predicted gene, 47022
A730043B01Rik 10 49706666 to 49707887 1221 unclassified gene RIKEN cDNA A730043B01 gene
Tssr97541 10 49710633 to 49710639 6 - TSS region transcription start site region 97541
Tssr97542 10 49723052 to 49723064 12 - TSS region transcription start site region 97542
Cpgi1521 10 49783011 to 49783466 455 CpG island CpG island 1521
Tssr97543 10 49783490 to 49783582 92 - TSS region transcription start site region 97543
Tssr97544 10 49783673 to 49783727 54 - TSS region transcription start site region 97544
Cpgi1522 10 49788236 to 49789229 993 CpG island CpG island 1522
Tssr97545 10 49788743 to 49788769 26 - TSS region transcription start site region 97545
Gm48123 10 49788827 to 49790167 1340 + unclassified gene predicted gene, 48123
Gm48125 10 49799325 to 49801079 1754 + unclassified gene predicted gene, 48125
Gm48128 10 49826270 to 49830115 3845 + pseudogene predicted gene, 48128
Tssr3190 10 49832025 to 49832029 4 + TSS region transcription start site region 3190
Gm48130 10 49955660 to 49955981 321 - pseudogene predicted gene, 48130
Gm48131 10 49980034 to 49981881 1847 - unclassified gene predicted gene, 48131