Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:47646040-49756188

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm46198 10 47753047 to 47754894 1847 - pseudogene predicted gene, 46198
Gm47331 10 47941841 to 47945427 3586 + pseudogene predicted gene, 47331
Gm47332 10 47973431 to 47973696 265 + pseudogene predicted gene, 47332
Phl2 10 48098403 to 70276821 22178418 QTL progressive hearing loss 2
Heal16 10 48098403 to 48098534 131 QTL wound healing/regeneration 16
D10Mit170 10 48098403 to 48098534 131 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 170
Gm47353 10 48411355 to 48411667 312 - unclassified gene predicted gene, 47353
Gm23584 10 48437822 to 48437950 128 + snoRNA gene predicted gene, 23584
Gm47354 10 48534981 to 48536356 1375 - lincRNA gene predicted gene, 47354
Gm47355 10 48566168 to 48569999 3831 + pseudogene predicted gene, 47355
Gm24256 10 48619312 to 48619395 83 - snRNA gene predicted gene, 24256
Gm47356 10 48678011 to 48681857 3846 - pseudogene predicted gene, 47356
Gm47364 10 48682690 to 48682973 283 + pseudogene predicted gene, 47364
Gm47377 10 48692852 to 48694412 1560 + pseudogene predicted gene, 47377
Bmch4 10 48701040 to 48701188 148 QTL bone mechanical trait 4
D10Mit40 10 48701040 to 48701188 148 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 40
D10Mit36 10 48701045 to 48701188 143 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 36
Gm47379 10 48810278 to 48810481 203 - pseudogene predicted gene, 47379
Gm3473 10 48852431 to 48853526 1095 + pseudogene predicted gene 3473
Gm47378 10 48868578 to 48870245 1667 + unclassified gene predicted gene, 47378
Gm47380 10 48910116 to 48910533 417 + unclassified gene predicted gene, 47380
Grik2 10 49094842 to 49789255 694413 - protein coding gene glutamate receptor, ionotropic, kainate 2 (beta 2)
Gm47017 10 49188994 to 49192365 3371 - unclassified gene predicted gene, 47017
Gm18512 10 49199715 to 49200261 546 + pseudogene predicted gene, 18512
Tssr97535 10 49218373 to 49218376 3 - TSS region transcription start site region 97535
Tssr97536 10 49218974 to 49218978 4 - TSS region transcription start site region 97536
Gm26543 10 49219422 to 49225653 6231 - sense intronic lncRNA gene predicted gene, 26543
Tssr97537 10 49231890 to 49231897 7 - TSS region transcription start site region 97537
Gm47018 10 49236915 to 49237861 946 - sense intronic lncRNA gene predicted gene, 47018
Tssr97538 10 49272808 to 49272833 25 - TSS region transcription start site region 97538
Tssr97539 10 49364425 to 49364450 25 - TSS region transcription start site region 97539
Gm47023 10 49482000 to 49484479 2479 - unclassified gene predicted gene, 47023
Tssr97540 10 49534098 to 49534104 6 - TSS region transcription start site region 97540
Gm47016 10 49661647 to 49663273 1626 - unclassified gene predicted gene, 47016
Gm47022 10 49700363 to 49702834 2471 - unclassified gene predicted gene, 47022
A730043B01Rik 10 49706666 to 49707887 1221 unclassified gene RIKEN cDNA A730043B01 gene
Tssr97541 10 49710633 to 49710639 6 - TSS region transcription start site region 97541
Tssr97542 10 49723052 to 49723064 12 - TSS region transcription start site region 97542