MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 10:4663445-5063457

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Esr1	10	4611989 to 5005633	393644	+	protein coding gene	estrogen receptor 1 (alpha)
Tssr92270	10	4709815 to 4709862	47	+	TSS region	transcription start site region 92270
Cpgi1263	10	4709999 to 4710306	307		CpG island	CpG island 1263
Tssr92271	10	4710119 to 4710166	47	+	TSS region	transcription start site region 92271
Tssr92272	10	4710167 to 4710186	19	+	TSS region	transcription start site region 92272
Tssr92273	10	4710193 to 4710204	11	+	TSS region	transcription start site region 92273
Tssr92274	10	4711674 to 4711685	11	+	TSS region	transcription start site region 92274
Cpgi1262	10	4712030 to 4713084	1054		CpG island	CpG island 1262
Tssr92275	10	4819487 to 4819491	4	+	TSS region	transcription start site region 92275
Tssr92276	10	4862315 to 4862319	4	+	TSS region	transcription start site region 92276
Tssr92277	10	4863445 to 4863457	12	+	TSS region	transcription start site region 92277
Tssr92278	10	4959586 to 4959591	5	+	TSS region	transcription start site region 92278
Tssr92279	10	4981518 to 4981534	16	+	TSS region	transcription start site region 92279
Tssr92280	10	5003430 to 5003435	5	+	TSS region	transcription start site region 92280
Syne1	10	5020192 to 5550692	530500	-	protein coding gene	spectrin repeat containing, nuclear envelope 1
5330421C15Rik	10	5023496 to 5029002	5506		unclassified gene	RIKEN cDNA 5330421C15 gene
Tssr3117	10	5032271 to 5032276	5	+	TSS region	transcription start site region 3117
Gm25694	10	5036175 to 5036456	281	-	ribozyme gene	predicted gene, 25694
Wght8	10	44000000 to 5000000	-39000000		QTL	weight 8