Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:45188831-47277617

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76 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Psrs1 10 27014268 to 46844387 19830119 QTL psoriasis susceptibility 1
repro3 10 44145937 to 46844387 2698450 heritable phenotypic marker reproductive mutation 3, JAX Reproductive Mutagenesis Program
Gm27723 10 45247087 to 45247149 62 + snRNA gene predicted gene, 27723
Gm26016 10 45268603 to 45268731 128 - snoRNA gene predicted gene, 26016
Gm15934 10 45287311 to 45289424 2113 - antisense lncRNA gene predicted gene 15934
Tssr93186 10 45289168 to 45289202 34 + TSS region transcription start site region 93186
Cpgi1516 10 45289170 to 45289981 811 CpG island CpG island 1516
Tssr97522 10 45289256 to 45289262 6 - TSS region transcription start site region 97522
Popdc3 10 45289305 to 45318450 29145 + protein coding gene popeye domain containing 3
Tssr93187 10 45289348 to 45289430 82 + TSS region transcription start site region 93187
Tssr97523 10 45289690 to 45289700 10 - TSS region transcription start site region 97523
Gm47433 10 45297809 to 45298271 462 - pseudogene predicted gene, 47433
Cpgi1517 10 45335177 to 45336260 1083 CpG island CpG island 1517
Tssr93188 10 45335723 to 45335744 21 + TSS region transcription start site region 93188
Tssr93189 10 45335751 to 45335789 38 + TSS region transcription start site region 93189
Bves 10 45335762 to 45369708 33946 + protein coding gene blood vessel epicardial substance
Tssr93190 10 45335886 to 45335897 11 + TSS region transcription start site region 93190
Tssr93191 10 45335905 to 45335927 22 + TSS region transcription start site region 93191
Tssr93192 10 45336304 to 45336308 4 + TSS region transcription start site region 93192
Lin28b 10 45376620 to 45486395 109775 - protein coding gene lin-28 homolog B (C. elegans)
Gm35372 10 45444863 to 45461197 16334 + lncRNA gene predicted gene, 35372
Tssr93193 10 45452145 to 45452147 2 + TSS region transcription start site region 93193
D10Ertd755e 10 45464780 to 45464982 202 DNA segment DNA segment, Chr 10, ERATO Doi 755, expressed
Tssr97524 10 45470249 to 45470260 11 - TSS region transcription start site region 97524
Cpgi1518 10 45485543 to 45487057 1514 CpG island CpG island 1518
Tssr97525 10 45486363 to 45486384 21 - TSS region transcription start site region 97525
Tssr97526 10 45486420 to 45486436 16 - TSS region transcription start site region 97526
Tssr97527 10 45486442 to 45486461 19 - TSS region transcription start site region 97527
Gm27731 10 45537244 to 45537350 106 + miRNA gene predicted gene, 27731
Dbil5-ps 10 45543277 to 45543980 703 - pseudogene diazepam binding inhibitor-like 5, pseudogene
Gm3805 10 45577483 to 45578117 634 unclassified gene predicted gene 3805
Cpgi1519 10 45577643 to 45578860 1217 CpG island CpG island 1519
Tssr93194 10 45577811 to 45577914 103 + TSS region transcription start site region 93194
Hace1 10 45577829 to 45712345 134516 + protein coding gene HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
Tssr93195 10 45577916 to 45577928 12 + TSS region transcription start site region 93195
Tssr97528 10 45578100 to 45578111 11 - TSS region transcription start site region 97528
Tssr97529 10 45578121 to 45578127 6 - TSS region transcription start site region 97529
Gm47504 10 45581219 to 45581571 352 + pseudogene predicted gene, 47504
Tssr93196 10 45633834 to 45633837 3 + TSS region transcription start site region 93196
Tssr93197 10 45634574 to 45634596 22 + TSS region transcription start site region 93197
Tssr93198 10 45634637 to 45634640 3 + TSS region transcription start site region 93198
Gm47503 10 45656955 to 45661912 4957 + unclassified gene predicted gene, 47503
Gm47502 10 45680957 to 45681525 568 + pseudogene predicted gene, 47502
Tssr93199 10 45685995 to 45685997 2 + TSS region transcription start site region 93199
Tssr93200 10 45807533 to 45807540 7 + TSS region transcription start site region 93200
Tssr93201 10 45807558 to 45807569 11 + TSS region transcription start site region 93201
D030045P18Rik 10 45807704 to 45852018 44314 + lincRNA gene RIKEN cDNA D030045P18 gene
Tssr93202 10 45807759 to 45807778 19 + TSS region transcription start site region 93202
Tssr93203 10 45807779 to 45807801 22 + TSS region transcription start site region 93203
Gm27410 10 45816747 to 45816861 114 - miRNA gene predicted gene, 27410
Tssr93204 10 45868746 to 45868762 16 + TSS region transcription start site region 93204
Cpgi1520 10 45875272 to 45875452 180 CpG island CpG island 1520
Gpx4-ps2 10 45875290 to 45876081 791 + pseudogene glutathione peroxidase 4, pseudogene 2
Tssr93205 10 45875304 to 45875309 5 + TSS region transcription start site region 93205
Tssr93206 10 46065298 to 46065301 3 + TSS region transcription start site region 93206
Gm35430 10 46228831 to 46237617 8786 + lincRNA gene predicted gene, 35430
Gm40640 10 46303684 to 46328475 24791 + lncRNA gene predicted gene, 40640
Gm25740 10 46377609 to 46377715 106 + snRNA gene predicted gene, 25740
Tssr97530 10 46505633 to 46505635 2 - TSS region transcription start site region 97530
Tssr93207 10 46526192 to 46526193 1 + TSS region transcription start site region 93207
D10Mit285 10 46569220 to 46569326 106 DNA segment DNA Segment, Chr 10 Massachusetts Institute of Technology 285
Tssr93208 10 46597929 to 46597939 10 + TSS region transcription start site region 93208
Gm23481 10 46658508 to 46658638 130 - snoRNA gene predicted gene, 23481
Gm19994 10 46670144 to 46670729 585 + pseudogene predicted gene, 19994
Tssr97531 10 46819898 to 46819911 13 - TSS region transcription start site region 97531
Tssr97532 10 46819921 to 46819930 9 - TSS region transcription start site region 97532
Gm25650 10 46838346 to 46838507 161 - snRNA gene predicted gene, 25650
Angvq1 10 46844307 to 82655287 35810980 QTL angiogenesis by VEGF QTL 1
Cfid 10 46844307 to 46844387 80 QTL cystic fibrosis intestinal distress
D10Mit194 10 46844307 to 46844387 80 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 194
Gm47562 10 46856353 to 46856502 149 - pseudogene predicted gene, 47562
Gm35552 10 47016652 to 47102832 86180 - lincRNA gene predicted gene, 35552
Gm47568 10 47024247 to 47037346 13099 + lincRNA gene predicted gene, 47568
Gm3442 10 47080534 to 47081243 709 + pseudogene predicted gene 3442
Tssr97533 10 47102689 to 47102700 11 - TSS region transcription start site region 97533
Tssr97534 10 47102734 to 47102752 18 - TSS region transcription start site region 97534