Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:44577292-45557303

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73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm48061 10 44580517 to 44590238 9721 - lincRNA gene predicted gene, 48061
Gm5950 10 44589928 to 44592573 2645 + pseudogene predicted gene 5950
Gm22087 10 44597240 to 44597327 87 - snRNA gene predicted gene, 22087
Gm48065 10 44597889 to 44602174 4285 - lincRNA gene predicted gene, 48065
Gm35154 10 44599113 to 44689114 90001 + lincRNA gene predicted gene, 35154
Tssr93172 10 44599816 to 44599868 52 + TSS region transcription start site region 93172
Tssr93173 10 44599877 to 44599906 29 + TSS region transcription start site region 93173
Tssr97518 10 44602167 to 44602193 26 - TSS region transcription start site region 97518
Tssr93174 10 44611821 to 44611841 20 + TSS region transcription start site region 93174
Tssr93175 10 44612001 to 44612012 11 + TSS region transcription start site region 93175
Tssr97519 10 44631661 to 44631686 25 - TSS region transcription start site region 97519
Gm48066 10 44647518 to 44662496 14978 + lincRNA gene predicted gene, 48066
Gm27977 10 44668384 to 44668494 110 + rRNA gene predicted gene, 27977
Tssr93176 10 44686246 to 44686250 4 + TSS region transcription start site region 93176
Gm47388 10 44697180 to 44699931 2751 + unclassified gene predicted gene, 47388
Gm47389 10 44715558 to 44717165 1607 + lincRNA gene predicted gene, 47389
D10Jcs17 10 44716771 to 44717057 286 DNA segment DNA segment, Chr 10, John C. Schimenti 17
4930431F10Rik 10 44730777 to 44738900 8123 - lincRNA gene RIKEN cDNA 4930431F10 gene
Gm47392 10 44730940 to 44823886 92946 + lincRNA gene predicted gene, 47392
Tssr93177 10 44731007 to 44731016 9 + TSS region transcription start site region 93177
Gm22503 10 44732353 to 44732467 114 + snRNA gene predicted gene, 22503
Gm18250 10 44742713 to 44743412 699 pseudogene predicted gene, 18250
Gm47398 10 44851393 to 44866786 15393 - lincRNA gene predicted gene, 47398
Tssr93178 10 44852589 to 44852590 1 + TSS region transcription start site region 93178
Gm6983 10 44852614 to 44853241 627 + pseudogene predicted gene 6983
Tssr97520 10 44866794 to 44866799 5 - TSS region transcription start site region 97520
Gm40638 10 44902617 to 44943276 40659 - lincRNA gene predicted gene, 40638
Gm24271 10 44922067 to 44922177 110 - miRNA gene predicted gene, 24271
D10Mit148 10 44999904 to 45000035 131 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 148
Gm4795 10 45006110 to 45007117 1007 + pseudogene predicted pseudogene 4795
Gm40639 10 45024302 to 45028152 3850 + lincRNA gene predicted gene, 40639
D10Mit216 10 45041557 to 45041664 107 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 216
Tssr97521 10 45048696 to 45048705 9 - TSS region transcription start site region 97521
2310075K07Rik 10 45064937 to 45067332 2395 - unclassified non-coding RNA gene RIKEN cDNA 2310075K07 gene
Cpgi1515 10 45066585 to 45067986 1401 CpG island CpG island 1515
Tssr93179 10 45067035 to 45067042 7 + TSS region transcription start site region 93179
Tssr93180 10 45067073 to 45067088 15 + TSS region transcription start site region 93180
Tssr93181 10 45067167 to 45067279 112 + TSS region transcription start site region 93181
Prep 10 45067214 to 45159981 92767 + protein coding gene prolyl endopeptidase
Tssr93182 10 45067292 to 45067303 11 + TSS region transcription start site region 93182
Gm23766 10 45095629 to 45095708 79 - miRNA gene predicted gene, 23766
C87926 10 45101199 to 45101939 740 unclassified gene cDNA sequence, C87926
Tssr93183 10 45107513 to 45107522 9 + TSS region transcription start site region 93183
Tssr93184 10 45107532 to 45107573 41 + TSS region transcription start site region 93184
Tssr93185 10 45107581 to 45107588 7 + TSS region transcription start site region 93185
Gm27723 10 45247087 to 45247149 62 + snRNA gene predicted gene, 27723
Gm26016 10 45268603 to 45268731 128 - snoRNA gene predicted gene, 26016
Gm15934 10 45287311 to 45289424 2113 - antisense lncRNA gene predicted gene 15934
Tssr93186 10 45289168 to 45289202 34 + TSS region transcription start site region 93186
Cpgi1516 10 45289170 to 45289981 811 CpG island CpG island 1516
Tssr97522 10 45289256 to 45289262 6 - TSS region transcription start site region 97522
Popdc3 10 45289305 to 45318450 29145 + protein coding gene popeye domain containing 3
Tssr93187 10 45289348 to 45289430 82 + TSS region transcription start site region 93187
Tssr97523 10 45289690 to 45289700 10 - TSS region transcription start site region 97523
Gm47433 10 45297809 to 45298271 462 - pseudogene predicted gene, 47433
Cpgi1517 10 45335177 to 45336260 1083 CpG island CpG island 1517
Tssr93188 10 45335723 to 45335744 21 + TSS region transcription start site region 93188
Tssr93189 10 45335751 to 45335789 38 + TSS region transcription start site region 93189
Bves 10 45335762 to 45369708 33946 + protein coding gene blood vessel epicardial substance
Tssr93190 10 45335886 to 45335897 11 + TSS region transcription start site region 93190
Tssr93191 10 45335905 to 45335927 22 + TSS region transcription start site region 93191
Tssr93192 10 45336304 to 45336308 4 + TSS region transcription start site region 93192
Lin28b 10 45376620 to 45486395 109775 - protein coding gene lin-28 homolog B (C. elegans)
Gm35372 10 45444863 to 45461197 16334 + lncRNA gene predicted gene, 35372
Tssr93193 10 45452145 to 45452147 2 + TSS region transcription start site region 93193
D10Ertd755e 10 45464780 to 45464982 202 DNA segment DNA segment, Chr 10, ERATO Doi 755, expressed
Tssr97524 10 45470249 to 45470260 11 - TSS region transcription start site region 97524
Cpgi1518 10 45485543 to 45487057 1514 CpG island CpG island 1518
Tssr97525 10 45486363 to 45486384 21 - TSS region transcription start site region 97525
Tssr97526 10 45486420 to 45486436 16 - TSS region transcription start site region 97526
Tssr97527 10 45486442 to 45486461 19 - TSS region transcription start site region 97527
Gm27731 10 45537244 to 45537350 106 + miRNA gene predicted gene, 27731
Dbil5-ps 10 45543277 to 45543980 703 - pseudogene diazepam binding inhibitor-like 5, pseudogene