Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:44097742-44438243

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Crybg1 10 43950636 to 44148853 198217 - protein coding gene crystallin beta-gamma domain containing 1
Tssr97501 10 44099353 to 44099358 5 - TSS region transcription start site region 97501
repro3 10 44145937 to 46844387 2698450 heritable phenotypic marker reproductive mutation 3, JAX Reproductive Mutagenesis Program
D10Mit38 10 44145937 to 44146085 148 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 38
Cpgi1509 10 44148457 to 44149246 789 CpG island CpG island 1509
Tssr97502 10 44148787 to 44148804 17 - TSS region transcription start site region 97502
Tssr97503 10 44148816 to 44148834 18 - TSS region transcription start site region 97503
Tssr97504 10 44148847 to 44148858 11 - TSS region transcription start site region 97504
Tssr97505 10 44148941 to 44148950 9 - TSS region transcription start site region 97505
Tssr97506 10 44148962 to 44148969 7 - TSS region transcription start site region 97506
Gm5949 10 44153470 to 44154890 1420 + pseudogene predicted gene 5949
Gm18669 10 44169577 to 44170354 777 - pseudogene predicted gene, 18669
Tssr97507 10 44170303 to 44170351 48 - TSS region transcription start site region 97507
Tssr93162 10 44170442 to 44170467 25 + TSS region transcription start site region 93162
Speer5-ps1 10 44170447 to 44219585 49138 + pseudogene spermatogenesis associated glutamate (E)-rich protein 5, pseudogene 1
Tssr93163 10 44211376 to 44211380 4 + TSS region transcription start site region 93163
Gm40637 10 44267742 to 44268243 501 - lncRNA gene predicted gene, 40637
Cpgi1510 10 44267971 to 44268896 925 CpG island CpG island 1510
Tssr93164 10 44268328 to 44268379 51 + TSS region transcription start site region 93164
Atg5 10 44268358 to 44364291 95933 + protein coding gene autophagy related 5
Tssr93165 10 44268389 to 44268408 19 + TSS region transcription start site region 93165
Tssr93166 10 44268422 to 44268445 23 + TSS region transcription start site region 93166
Tssr93167 10 44268448 to 44268528 80 + TSS region transcription start site region 93167
Tssr93168 10 44270248 to 44270253 5 + TSS region transcription start site region 93168
Gm19229 10 44335782 to 44336301 519 - pseudogene predicted gene, 19229
Tssr93169 10 44358392 to 44358398 6 + TSS region transcription start site region 93169
Mir1929 10 44359676 to 44359768 92 + miRNA gene microRNA 1929
Gm35028 10 44418400 to 44424324 5924 - lincRNA gene predicted gene, 35028
Tssr97508 10 44423980 to 44423995 15 - TSS region transcription start site region 97508
Prdm1 10 44437177 to 44528501 91324 - protein coding gene PR domain containing 1, with ZNF domain