Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:43549223-43729648

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm47889 10 43518571 to 43555817 37246 + lincRNA gene predicted gene, 47889
Cpgi1503 10 43578313 to 43580139 1826 CpG island CpG island 1503
Tssr93141 10 43579161 to 43579178 17 + TSS region transcription start site region 93141
Cd24a 10 43579169 to 43584265 5096 + protein coding gene CD24a antigen
Tssr93142 10 43579923 to 43579945 22 + TSS region transcription start site region 93142
Cpgi1504 10 43580798 to 43581030 232 CpG island CpG island 1504
D10Mit107 10 43581643 to 43581744 101 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 107
Tssr93143 10 43582689 to 43582731 42 + TSS region transcription start site region 93143
Tssr93144 10 43583896 to 43583900 4 + TSS region transcription start site region 93144
Tssr93145 10 43593392 to 43593403 11 + TSS region transcription start site region 93145
Tssr93146 10 43593417 to 43593446 29 + TSS region transcription start site region 93146
F930017D23Rik 10 43593427 to 43630914 37487 + lincRNA gene RIKEN cDNA F930017D23 gene
Tssr93147 10 43603382 to 43603387 5 + TSS region transcription start site region 93147
Tssr93148 10 43610468 to 43610477 9 + TSS region transcription start site region 93148
Tssr93149 10 43610509 to 43610518 9 + TSS region transcription start site region 93149
Rpl26-ps1 10 43639223 to 43639648 425 + pseudogene ribosomal protein L26, pseudogene 1
D10Mit215 10 43645003 to 43645126 123 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 215
fsq 10 43656132 to 53772211 10116079 heritable phenotypic marker flying squirrel
D10Mit54 10 43656132 to 43656235 103 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 54
Tssr97474 10 43656329 to 43656332 3 - TSS region transcription start site region 97474
Tssr93150 10 43656470 to 43656476 6 + TSS region transcription start site region 93150
Gm34481 10 43658852 to 43662397 3545 + lincRNA gene predicted gene, 34481
Gm40632 10 43675768 to 43682850 7082 + lncRNA gene predicted gene, 40632
Gm47927 10 43681001 to 43687302 6301 - lincRNA gene predicted gene, 47927
Gm47926 10 43690726 to 43691828 1102 - lincRNA gene predicted gene, 47926
Tssr93151 10 43695450 to 43695469 19 + TSS region transcription start site region 93151
Tssr93152 10 43719632 to 43719634 2 + TSS region transcription start site region 93152
Cpgi1505 10 43723518 to 43723770 252 CpG island CpG island 1505