Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:43277531-43548762

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pdss2 10 43221486 to 43464882 243396 + protein coding gene prenyl (solanesyl) diphosphate synthase, subunit 2
Tssr93130 10 43319308 to 43319314 6 + TSS region transcription start site region 93130
Gm16546 10 43319360 to 43319714 354 + pseudogene predicted gene 16546
Gm40631 10 43320306 to 43344041 23735 - lncRNA gene predicted gene, 40631
Gm47857 10 43363010 to 43366888 3878 + unclassified gene predicted gene, 47857
Rps19-ps11 10 43373488 to 43373920 432 - pseudogene ribosomal protein S19, pseudogene 11
Tssr97469 10 43373949 to 43373954 5 - TSS region transcription start site region 97469
Gm47856 10 43412531 to 43413762 1231 + unclassified gene predicted gene, 47856
Tssr3188 10 43438473 to 43438474 1 + TSS region transcription start site region 3188
Gm3699 10 43456427 to 43456501 74 - pseudogene predicted gene 3699
Tssr97470 10 43456540 to 43456549 9 - TSS region transcription start site region 97470
Cpgi1500 10 43478355 to 43480142 1787 CpG island CpG island 1500
Tssr93131 10 43478622 to 43478651 29 + TSS region transcription start site region 93131
Tssr93132 10 43478812 to 43478863 51 + TSS region transcription start site region 93132
Bend3 10 43479140 to 43515417 36277 + protein coding gene BEN domain containing 3
Tssr93133 10 43479141 to 43479194 53 + TSS region transcription start site region 93133
Tssr93134 10 43479201 to 43479249 48 + TSS region transcription start site region 93134
Tssr93135 10 43479282 to 43479329 47 + TSS region transcription start site region 93135
Tssr93136 10 43479344 to 43479354 10 + TSS region transcription start site region 93136
Cpgi1501 10 43511230 to 43511799 569 CpG island CpG island 1501
Tssr93137 10 43518566 to 43518581 15 + TSS region transcription start site region 93137
Gm47889 10 43518571 to 43555817 37246 + lincRNA gene predicted gene, 47889
Tssr93138 10 43518586 to 43518600 14 + TSS region transcription start site region 93138
Tssr93139 10 43524080 to 43524093 13 + TSS region transcription start site region 93139
Gm9803 10 43524084 to 43524617 533 + pseudogene predicted gene 9803
Tssr93140 10 43524134 to 43524158 24 + TSS region transcription start site region 93140
1700021F05Rik 10 43525133 to 43540994 15861 - protein coding gene RIKEN cDNA 1700021F05 gene
Tssr97471 10 43530832 to 43530863 31 - TSS region transcription start site region 97471
Tssr97472 10 43533164 to 43533169 5 - TSS region transcription start site region 97472
Cpgi1502 10 43540331 to 43541234 903 CpG island CpG island 1502
Tssr97473 10 43540945 to 43541024 79 - TSS region transcription start site region 97473