Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:43238488-43508920

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pdss2 10 43221486 to 43464882 243396 + protein coding gene prenyl (solanesyl) diphosphate synthase, subunit 2
Tssr93130 10 43319308 to 43319314 6 + TSS region transcription start site region 93130
Gm16546 10 43319360 to 43319714 354 + pseudogene predicted gene 16546
Gm40631 10 43320306 to 43344041 23735 - lncRNA gene predicted gene, 40631
Gm47857 10 43363010 to 43366888 3878 + unclassified gene predicted gene, 47857
Rps19-ps11 10 43373488 to 43373920 432 - pseudogene ribosomal protein S19, pseudogene 11
Tssr97469 10 43373949 to 43373954 5 - TSS region transcription start site region 97469
Gm47856 10 43412531 to 43413762 1231 + unclassified gene predicted gene, 47856
Tssr3188 10 43438473 to 43438474 1 + TSS region transcription start site region 3188
Gm3699 10 43456427 to 43456501 74 - pseudogene predicted gene 3699
Tssr97470 10 43456540 to 43456549 9 - TSS region transcription start site region 97470
Cpgi1500 10 43478355 to 43480142 1787 CpG island CpG island 1500
Tssr93131 10 43478622 to 43478651 29 + TSS region transcription start site region 93131
Tssr93132 10 43478812 to 43478863 51 + TSS region transcription start site region 93132
Bend3 10 43479140 to 43515417 36277 + protein coding gene BEN domain containing 3
Tssr93133 10 43479141 to 43479194 53 + TSS region transcription start site region 93133
Tssr93134 10 43479201 to 43479249 48 + TSS region transcription start site region 93134
Tssr93135 10 43479282 to 43479329 47 + TSS region transcription start site region 93135
Tssr93136 10 43479344 to 43479354 10 + TSS region transcription start site region 93136