Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:41566633-41926650

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ccdc162 10 41538844 to 41716537 177693 - protein coding gene coiled-coil domain containing 162
5730435O14Rik 10 41568016 to 41576476 8460 + lncRNA gene RIKEN cDNA 5730435O14 gene
D10Mit109 10 41576455 to 41576602 147 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 109
Tssr97409 10 41606450 to 41606456 6 - TSS region transcription start site region 97409
Tssr97410 10 41633864 to 41633875 11 - TSS region transcription start site region 97410
Tssr97411 10 41634142 to 41634151 9 - TSS region transcription start site region 97411
Mir3473b 10 41670739 to 41670793 54 + miRNA gene microRNA 3473b
Cpgi1474 10 41684556 to 41684781 225 CpG island CpG island 1474
Gm47099 10 41685771 to 41686056 285 - pseudogene predicted gene, 47099
Tssr93062 10 41685914 to 41685963 49 + TSS region transcription start site region 93062
Tssr97412 10 41685938 to 41685952 14 - TSS region transcription start site region 97412
Tssr97413 10 41685970 to 41685981 11 - TSS region transcription start site region 97413
Tssr97414 10 41685985 to 41686002 17 - TSS region transcription start site region 97414
Tssr97415 10 41716433 to 41716463 30 - TSS region transcription start site region 97415
Cep57l1 10 41718840 to 41809868 91028 - protein coding gene centrosomal protein 57-like 1
Tssr97416 10 41746382 to 41746403 21 - TSS region transcription start site region 97416
Tssr97417 10 41746633 to 41746650 17 - TSS region transcription start site region 97417
Tssr93063 10 41746749 to 41746758 9 + TSS region transcription start site region 93063
Tssr97418 10 41752211 to 41752267 56 - TSS region transcription start site region 97418
Tssr97419 10 41754914 to 41754922 8 - TSS region transcription start site region 97419
BC048559 10 41774580 to 41780734 6154 + antisense lncRNA gene cDNA sequence BC048559
Gm46222 10 41797597 to 41805332 7735 - pseudogene predicted gene, 46222
Cpgi1475 10 41809470 to 41811087 1617 CpG island CpG island 1475
Tssr97420 10 41809620 to 41809654 34 - TSS region transcription start site region 97420
Tssr97421 10 41809880 to 41809915 35 - TSS region transcription start site region 97421
Tssr93064 10 41809948 to 41809963 15 + TSS region transcription start site region 93064
Tssr93065 10 41809998 to 41810013 15 + TSS region transcription start site region 93065
Tssr93066 10 41810173 to 41810245 72 + TSS region transcription start site region 93066
Tssr93067 10 41810528 to 41810580 52 + TSS region transcription start site region 93067
Sesn1 10 41810574 to 41908436 97862 + protein coding gene sestrin 1
Tssr93068 10 41810844 to 41810861 17 + TSS region transcription start site region 93068
9930024M15Rik 10 41826538 to 41829121 2583 + unclassified gene RIKEN cDNA 9930024M15 gene
9830137J09Rik 10 41874166 to 41876629 2463 unclassified non-coding RNA gene Riken cDNA 9830137J09 gene
Cpgi1476 10 41887081 to 41887866 785 CpG island CpG island 1476
Tssr93069 10 41887428 to 41887455 27 + TSS region transcription start site region 93069
Tssr93070 10 41887457 to 41887498 41 + TSS region transcription start site region 93070
Tssr93071 10 41893947 to 41893959 12 + TSS region transcription start site region 93071
Tssr93072 10 41893967 to 41893978 11 + TSS region transcription start site region 93072
Tssr93073 10 41910887 to 41910890 3 + TSS region transcription start site region 93073
Armc2 10 41914990 to 42018442 103452 - protein coding gene armadillo repeat containing 2