Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:40585195-41487214

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68 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc22a16 10 40570336 to 40604132 33796 + protein coding gene solute carrier family 22 (organic cation transporter), member 16
Tssr93026 10 40629987 to 40630053 66 + TSS region transcription start site region 93026
Ddo 10 40630011 to 40681847 51836 + protein coding gene D-aspartate oxidase
Tssr93027 10 40630057 to 40630063 6 + TSS region transcription start site region 93027
Tssr3184 10 40645320 to 40645322 2 + TSS region transcription start site region 3184
Tssr93028 10 40673069 to 40673110 41 + TSS region transcription start site region 93028
Cpgi1462 10 40682972 to 40683761 789 CpG island CpG island 1462
Tssr93029 10 40683253 to 40683267 14 + TSS region transcription start site region 93029
Mettl24 10 40683282 to 40811083 127801 + protein coding gene methyltransferase like 24
Tssr93030 10 40703678 to 40703696 18 + TSS region transcription start site region 93030
Cpgi1463 10 40810469 to 40810662 193 CpG island CpG island 1463
Cdc40 10 40831621 to 40883143 51522 - protein coding gene cell division cycle 40
Gm22948 10 40875640 to 40875882 242 - unclassified non-coding RNA gene predicted gene, 22948
Cpgi1464 10 40882739 to 40884730 1991 CpG island CpG island 1464
Tssr97391 10 40883073 to 40883130 57 - TSS region transcription start site region 97391
Tssr93031 10 40883469 to 40883483 14 + TSS region transcription start site region 93031
Tssr93032 10 40883493 to 40883508 15 + TSS region transcription start site region 93032
Tssr93033 10 40883520 to 40883598 78 + TSS region transcription start site region 93033
Wasf1 10 40883534 to 40938569 55035 + protein coding gene WAS protein family, member 1
Tssr93034 10 40883620 to 40883634 14 + TSS region transcription start site region 93034
Tssr93035 10 40883819 to 40883862 43 + TSS region transcription start site region 93035
Tssr93036 10 40931919 to 40931938 19 + TSS region transcription start site region 93036
Tssr93037 10 40936171 to 40936206 35 + TSS region transcription start site region 93037
Tssr97392 10 40936174 to 40936188 14 - TSS region transcription start site region 97392
Tssr93038 10 40936399 to 40936416 17 + TSS region transcription start site region 93038
Tssr93039 10 40938191 to 40938200 9 + TSS region transcription start site region 93039
Tssr97393 10 40985683 to 40985688 5 - TSS region transcription start site region 97393
Gm48057 10 41035195 to 41037214 2019 + lincRNA gene predicted gene, 48057
Gm19611 10 41046841 to 41049104 2263 - pseudogene predicted gene, 19611
Gpr6 10 41069977 to 41072285 2308 - protein coding gene G protein-coupled receptor 6
Cpgi1465 10 41070572 to 41071930 1358 CpG island CpG island 1465
Cpgi1466 10 41072049 to 41072429 380 CpG island CpG island 1466
Tssr97394 10 41072279 to 41072290 11 - TSS region transcription start site region 97394
Tssr97395 10 41072292 to 41072308 16 - TSS region transcription start site region 97395
Gm32284 10 41082816 to 41097910 15094 + lincRNA gene predicted gene, 32284
Tssr93040 10 41100967 to 41100968 1 + TSS region transcription start site region 93040
Gm32338 10 41102539 to 41135046 32507 - lincRNA gene predicted gene, 32338
Gm32411 10 41135153 to 41138185 3032 - lncRNA gene predicted gene, 32411
Cpgi1467 10 41151566 to 41151758 192 CpG island CpG island 1467
Fig4 10 41188172 to 41303241 115069 - protein coding gene FIG4 phosphoinositide 5-phosphatase
Gm25526 10 41216045 to 41216176 131 + snoRNA gene predicted gene, 25526
Tssr97396 10 41221320 to 41221332 12 - TSS region transcription start site region 97396
Tssr97397 10 41221397 to 41221402 5 - TSS region transcription start site region 97397
Tssr3185 10 41239865 to 41239866 1 + TSS region transcription start site region 3185
Cpgi1468 10 41302742 to 41303333 591 CpG island CpG island 1468
Tssr97398 10 41303095 to 41303140 45 - TSS region transcription start site region 97398
Tssr97399 10 41303171 to 41303250 79 - TSS region transcription start site region 97399
Ak9 10 41303432 to 41433569 130137 + protein coding gene adenylate kinase 9
Tssr93041 10 41303925 to 41303966 41 + TSS region transcription start site region 93041
Tssr93042 10 41303968 to 41303975 7 + TSS region transcription start site region 93042
Tssr93043 10 41343211 to 41343222 11 + TSS region transcription start site region 93043
Gm18305 10 41362837 to 41364964 2127 - pseudogene predicted gene, 18305
Gm18986 10 41378896 to 41380881 1985 - pseudogene predicted gene, 18986
Gm25626 10 41387900 to 41388006 106 + snRNA gene predicted gene, 25626
Gm47473 10 41403547 to 41403831 284 - pseudogene predicted gene, 47473
Gm27783 10 41408173 to 41408277 104 - rRNA gene predicted gene, 27783
Gm46221 10 41440918 to 41444303 3385 + protein coding gene predicted gene, 46221
Tssr97400 10 41450229 to 41450249 20 - TSS region transcription start site region 97400
Cpgi1469 10 41450268 to 41450894 626 CpG island CpG island 1469
Tssr93044 10 41450363 to 41450421 58 + TSS region transcription start site region 93044
Zbtb24 10 41450383 to 41465574 15191 + protein coding gene zinc finger and BTB domain containing 24
Cpgi1470 10 41475925 to 41476692 767 CpG island CpG island 1470
Mical1 10 41476314 to 41487032 10718 + protein coding gene microtubule associated monooxygenase, calponin and LIM domain containing 1
Tssr93045 10 41476326 to 41476392 66 + TSS region transcription start site region 93045
Tssr97401 10 41477202 to 41477234 32 - TSS region transcription start site region 97401
Cpgi1471 10 41477383 to 41477548 165 CpG island CpG island 1471
Tssr97402 10 41477577 to 41477580 3 - TSS region transcription start site region 97402
Smpd2 10 41487172 to 41490371 3199 - protein coding gene sphingomyelin phosphodiesterase 2, neutral