Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:40129893-40339896

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc16a10 10 40033532 to 40142258 108726 - protein coding gene solute carrier family 16 (monocarboxylic acid transporters), member 10
Tssr97373 10 40134128 to 40134132 4 - TSS region transcription start site region 97373
Tssr97374 10 40135021 to 40135035 14 - TSS region transcription start site region 97374
D10Ertd276e 10 40136326 to 40136542 216 DNA segment DNA segment, Chr 10, ERATO Doi 276, expressed
Cpgi1453 10 40141486 to 40142554 1068 CpG island CpG island 1453
Tssr97375 10 40142247 to 40142260 13 - TSS region transcription start site region 97375
Gm31992 10 40164110 to 40169759 5649 + lincRNA gene predicted gene, 31992
Gm47598 10 40180657 to 40183692 3035 - lincRNA gene predicted gene, 47598
Gm37786 10 40219583 to 40222807 3224 - unclassified gene predicted gene, 37786
Rpf2 10 40223246 to 40247036 23790 - protein coding gene ribosome production factor 2 homolog
Tssr97376 10 40227816 to 40227824 8 - TSS region transcription start site region 97376
Tssr97377 10 40227835 to 40227848 13 - TSS region transcription start site region 97377
Tssr97378 10 40233370 to 40233383 13 - TSS region transcription start site region 97378
Tssr97379 10 40234893 to 40234896 3 - TSS region transcription start site region 97379
Cpgi1454 10 40246625 to 40247273 648 CpG island CpG island 1454
Tssr97380 10 40246991 to 40247045 54 - TSS region transcription start site region 97380
Tssr97381 10 40247117 to 40247135 18 - TSS region transcription start site region 97381
Gtf3c6 10 40247701 to 40257856 10155 - protein coding gene general transcription factor IIIC, polypeptide 6, alpha
Cpgi1455 10 40257388 to 40257950 562 CpG island CpG island 1455
Tssr97382 10 40257648 to 40257687 39 - TSS region transcription start site region 97382
Tssr93011 10 40257708 to 40257735 27 + TSS region transcription start site region 93011
Tssr97383 10 40258082 to 40258092 10 - TSS region transcription start site region 97383
Tssr97384 10 40258112 to 40258132 20 - TSS region transcription start site region 97384
Tssr93012 10 40258463 to 40258470 7 + TSS region transcription start site region 93012
Rnu3a 10 40258576 to 40258679 103 + snRNA gene U3A small nuclear RNA
A930033M14Rik 10 40260934 to 40261333 399 + lincRNA gene RIKEN cDNA A930033M14 gene
Gm47867 10 40280683 to 40282053 1370 - pseudogene predicted gene, 47867
Tssr93013 10 40284019 to 40284024 5 + TSS region transcription start site region 93013
Amd1 10 40287458 to 40302186 14728 - protein coding gene S-adenosylmethionine decarboxylase 1
Cpgi1456 10 40300671 to 40301777 1106 CpG island CpG island 1456
Tssr93014 10 40300942 to 40300987 45 + TSS region transcription start site region 93014
Cpgi1457 10 40302160 to 40302882 722 CpG island CpG island 1457
Tssr97385 10 40302186 to 40302206 20 - TSS region transcription start site region 97385
Gm8948 10 40333951 to 40334320 369 + pseudogene predicted gene 8948