Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:39169728-39569739

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D030034A15Rik 10 39169300 to 39173252 3952 - lincRNA gene RIKEN cDNA D030034A15 gene
Cpgi1446 10 39171197 to 39171513 316 CpG island CpG island 1446
Tssr92977 10 39198433 to 39198442 9 + TSS region transcription start site region 92977
Gm6477 10 39198538 to 39199301 763 + pseudogene predicted gene 6477
Gm40626 10 39220646 to 39229693 9047 + lncRNA gene predicted gene, 40626
Tssr97331 10 39227764 to 39227765 1 - TSS region transcription start site region 97331
Gm31562 10 39245046 to 39255100 10054 + lincRNA gene predicted gene, 31562
Gm48486 10 39282341 to 39323417 41076 - lincRNA gene predicted gene, 48486
Gm31616 10 39368342 to 39369631 1289 - lncRNA gene predicted gene, 31616
Tssr92978 10 39369017 to 39369051 34 + TSS region transcription start site region 92978
Cpgi1447 10 39369333 to 39370660 1327 CpG island CpG island 1447
Tssr97332 10 39369560 to 39369595 35 - TSS region transcription start site region 97332
Tssr92979 10 39369728 to 39369739 11 + TSS region transcription start site region 92979
Tssr92980 10 39369750 to 39369804 54 + TSS region transcription start site region 92980
Fyn 10 39369769 to 39565381 195612 + protein coding gene Fyn proto-oncogene
Tssr92981 10 39369915 to 39369926 11 + TSS region transcription start site region 92981
Tssr92982 10 39369933 to 39369945 12 + TSS region transcription start site region 92982
Tssr92983 10 39413526 to 39413536 10 + TSS region transcription start site region 92983
Tssr92984 10 39420048 to 39420074 26 + TSS region transcription start site region 92984
Gm6963 10 39424618 to 39424996 378 - pseudogene predicted gene 6963
Tssr92985 10 39451284 to 39451325 41 + TSS region transcription start site region 92985
Tssr92986 10 39451487 to 39451495 8 + TSS region transcription start site region 92986
Tssr92987 10 39465461 to 39465485 24 + TSS region transcription start site region 92987
Tssr97333 10 39526108 to 39526111 3 - TSS region transcription start site region 97333
Tssr92988 10 39527558 to 39527606 48 + TSS region transcription start site region 92988
Tssr92989 10 39531845 to 39531884 39 + TSS region transcription start site region 92989
Tssr92990 10 39532096 to 39532102 6 + TSS region transcription start site region 92990
Tssr92991 10 39532987 to 39533014 27 + TSS region transcription start site region 92991
Tssr92992 10 39533136 to 39533147 11 + TSS region transcription start site region 92992
Tssr3182 10 39533260 to 39533273 13 + TSS region transcription start site region 3182
Tssr97334 10 39534760 to 39534775 15 - TSS region transcription start site region 97334
Tssr92993 10 39550988 to 39550994 6 + TSS region transcription start site region 92993
Tssr92994 10 39551457 to 39551484 27 + TSS region transcription start site region 92994
Gm16364 10 39556070 to 39558769 2699 - antisense lncRNA gene predicted gene 16364
Tssr92995 10 39558167 to 39558179 12 + TSS region transcription start site region 92995