Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:37226579-39206872

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr97325 10 37233311 to 37233321 10 - TSS region transcription start site region 97325
Tssr92964 10 37239043 to 37239046 3 + TSS region transcription start site region 92964
4930543K20Rik 10 37263394 to 37263748 354 - lincRNA gene RIKEN cDNA 4930543K20 gene
Tssr92965 10 37315385 to 37315390 5 + TSS region transcription start site region 92965
Gm26535 10 37319505 to 37338948 19443 + lincRNA gene predicted gene, 26535
Tssr97326 10 37321318 to 37321338 20 - TSS region transcription start site region 97326
Gm31202 10 37360698 to 37364361 3663 - lncRNA gene predicted gene, 31202
Gm31330 10 37430435 to 37436975 6540 - lncRNA gene predicted gene, 31330
Gm48172 10 37452452 to 37452680 228 - pseudogene predicted gene, 48172
Gm24710 10 37931680 to 37931780 100 + miRNA gene predicted gene, 24710
Gm46220 10 38059341 to 38063357 4016 + lncRNA gene predicted gene, 46220
2210408O09Rik 10 38059545 to 38063355 3810 unclassified non-coding RNA gene RIKEN cDNA 2210408O09 gene
Gm31378 10 38116245 to 38122061 5816 - lincRNA gene predicted gene, 31378
Tssr3181 10 38169832 to 38169834 2 + TSS region transcription start site region 3181
4930591E09Rik 10 38175780 to 38181903 6123 + lincRNA gene RIKEN cDNA 4930591E09 gene
Gm24889 10 38179453 to 38179584 131 + snoRNA gene predicted gene, 24889
Gm24297 10 38213359 to 38213426 67 + snoRNA gene predicted gene, 24297
Gm48173 10 38216579 to 38216872 293 - pseudogene predicted gene, 48173
Gm48197 10 38295074 to 38313846 18772 - lincRNA gene predicted gene, 48197
Gm40624 10 38354784 to 38382402 27618 + lncRNA gene predicted gene, 40624
Gm48198 10 38433979 to 38434135 156 - pseudogene predicted gene, 48198
Gm22911 10 38615375 to 38615481 106 - snRNA gene predicted gene, 22911
Rfpl4b 10 38820541 to 38821779 1238 - protein coding gene ret finger protein-like 4B
Gm17779 10 38928289 to 38928682 393 + pseudogene predicted gene, 17779
Tssr92966 10 38965192 to 38965201 9 + TSS region transcription start site region 92966
Cpgi1443 10 38965439 to 38966265 826 CpG island CpG island 1443
Lama4 10 38965515 to 39110188 144673 + protein coding gene laminin, alpha 4
Tssr92967 10 38965547 to 38965558 11 + TSS region transcription start site region 92967
Tssr92968 10 38965559 to 38965576 17 + TSS region transcription start site region 92968
Tssr92969 10 38965589 to 38965598 9 + TSS region transcription start site region 92969
Tssr92970 10 38965616 to 38965630 14 + TSS region transcription start site region 92970
Tssr92971 10 38966920 to 38966951 31 + TSS region transcription start site region 92971
Cpgi1444 10 39030442 to 39030600 158 CpG island CpG island 1444
Tssr92972 10 39043610 to 39043613 3 + TSS region transcription start site region 92972
Fam229b 10 39118804 to 39133914 15110 - protein coding gene family with sequence similarity 229, member B
Tssr97327 10 39122213 to 39122260 47 - TSS region transcription start site region 97327
Tssr97328 10 39122277 to 39122279 2 - TSS region transcription start site region 97328
Cpgi1445 10 39133771 to 39134357 586 CpG island CpG island 1445
Tssr97329 10 39133855 to 39133912 57 - TSS region transcription start site region 97329
Tssr97330 10 39133914 to 39133927 13 - TSS region transcription start site region 97330
Tssr92973 10 39133958 to 39133980 22 + TSS region transcription start site region 92973
Tube1 10 39133978 to 39151058 17080 + protein coding gene epsilon-tubulin 1
Tssr92974 10 39133981 to 39134031 50 + TSS region transcription start site region 92974
Tssr92975 10 39134050 to 39134066 16 + TSS region transcription start site region 92975
Tssr92976 10 39136937 to 39136963 26 + TSS region transcription start site region 92976
Ccn6 10 39150971 to 39163794 12823 - protein coding gene cellular communication network factor 6
Gm40625 10 39153231 to 39156244 3013 + lncRNA gene predicted gene, 40625
D030034A15Rik 10 39169300 to 39173252 3952 - lincRNA gene RIKEN cDNA D030034A15 gene
Cpgi1446 10 39171197 to 39171513 316 CpG island CpG island 1446
Tssr92977 10 39198433 to 39198442 9 + TSS region transcription start site region 92977
Gm6477 10 39198538 to 39199301 763 + pseudogene predicted gene 6477