Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:35716592-37071928

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm49446 10 35838490 to 35854475 15985 + lincRNA gene predicted gene, 49446
Gm31016 10 35838517 to 35846401 7884 + lncRNA gene predicted gene, 31016
Gm40623 10 35846471 to 35854217 7746 + lncRNA gene predicted gene, 40623
Gm47046 10 35849310 to 35859450 10140 - pseudogene predicted gene, 47046
Tssr3176 10 35911189 to 35911192 3 + TSS region transcription start site region 3176
Chol16 10 36039047 to 36039047 0 QTL cholesterol 16
Gm47048 10 36095876 to 36096495 619 + pseudogene predicted gene, 47048
Tssr92946 10 36148965 to 36148969 4 + TSS region transcription start site region 92946
Gm47049 10 36391592 to 36396928 5336 + lincRNA gene predicted gene, 47049
D10Mit156 10 36455282 to 36455410 128 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 156
Cpgi1437 10 36506535 to 36507762 1227 CpG island CpG island 1437
Hs3st5 10 36506814 to 36834397 327583 + protein coding gene heparan sulfate (glucosamine) 3-O-sulfotransferase 5
Tssr92947 10 36506834 to 36506846 12 + TSS region transcription start site region 92947
Tssr92948 10 36506907 to 36506921 14 + TSS region transcription start site region 92948
Tssr92949 10 36506950 to 36506997 47 + TSS region transcription start site region 92949
Tssr92950 10 36507013 to 36507024 11 + TSS region transcription start site region 92950
Tssr92951 10 36525387 to 36525392 5 + TSS region transcription start site region 92951
Gm47054 10 36611900 to 36614074 2174 - unclassified gene predicted gene, 47054
Tssr92952 10 36628235 to 36628248 13 + TSS region transcription start site region 92952
Tssr92953 10 36628263 to 36628280 17 + TSS region transcription start site region 92953
Tssr92954 10 36641083 to 36641087 4 + TSS region transcription start site region 92954
Tssr97279 10 36750191 to 36750196 5 - TSS region transcription start site region 97279
Gm22554 10 36775785 to 36775931 146 - snoRNA gene predicted gene, 22554
D10Mit45 10 36910675 to 36910852 177 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 45
Cpgi1438 10 36973966 to 36975408 1442 CpG island CpG island 1438
Tssr3177 10 36974520 to 36974531 11 + TSS region transcription start site region 3177
Tssr92955 10 36974536 to 36974556 20 + TSS region transcription start site region 92955
Hdac2 10 36974544 to 37001889 27345 + protein coding gene histone deacetylase 2
Tssr92956 10 36974558 to 36974579 21 + TSS region transcription start site region 92956
Tssr92957 10 36974721 to 36974751 30 + TSS region transcription start site region 92957
Tssr92958 10 36975072 to 36975120 48 + TSS region transcription start site region 92958
Tssr92959 10 36997043 to 36997061 18 + TSS region transcription start site region 92959