Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:34073256-35723820

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79 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trappc3l 10 34037597 to 34109815 72218 + protein coding gene trafficking protein particle complex 3 like
Calhm5 10 34091352 to 34096519 5167 - protein coding gene calcium homeostasis modulator family member 5
Tssr97253 10 34096375 to 34096389 14 - TSS region transcription start site region 97253
Tssr97254 10 34096464 to 34096467 3 - TSS region transcription start site region 97254
Tssr97255 10 34096480 to 34096497 17 - TSS region transcription start site region 97255
Tssr97256 10 34096507 to 34096554 47 - TSS region transcription start site region 97256
Calhm6 10 34126067 to 34127972 1905 - protein coding gene calcium homeostasis modulator family member 6
Cpgi1432 10 34127324 to 34127994 670 CpG island CpG island 1432
Tssr97257 10 34127919 to 34127930 11 - TSS region transcription start site region 97257
Tssr97258 10 34127955 to 34127980 25 - TSS region transcription start site region 97258
Tssr97259 10 34127997 to 34128014 17 - TSS region transcription start site region 97259
Dse 10 34151393 to 34207715 56322 - protein coding gene dermatan sulfate epimerase
Tssr97260 10 34151912 to 34151916 4 - TSS region transcription start site region 97260
D10Mit252 10 34160550 to 34160821 271 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 252
Gm47445 10 34178235 to 34179928 1693 - unclassified gene predicted gene, 47445
Tssr97261 10 34178576 to 34178581 5 - TSS region transcription start site region 97261
Tssr97262 10 34186485 to 34186496 11 - TSS region transcription start site region 97262
Tssr97263 10 34197763 to 34197768 5 - TSS region transcription start site region 97263
Cpgi1433 10 34206556 to 34207547 991 CpG island CpG island 1433
Tssr97264 10 34207177 to 34207200 23 - TSS region transcription start site region 97264
Tssr97265 10 34207201 to 34207265 64 - TSS region transcription start site region 97265
Tssr97266 10 34207423 to 34207480 57 - TSS region transcription start site region 97266
Tssr97267 10 34207486 to 34207511 25 - TSS region transcription start site region 97267
Tssr97268 10 34207574 to 34207589 15 - TSS region transcription start site region 97268
Tssr97269 10 34207827 to 34207849 22 - TSS region transcription start site region 97269
Tssr97270 10 34208251 to 34208276 25 - TSS region transcription start site region 97270
Tssr97271 10 34208294 to 34208321 27 - TSS region transcription start site region 97271
Gm18346 10 34213754 to 34214078 324 - pseudogene predicted gene, 18346
Gm26564 10 34230907 to 34233531 2624 - lincRNA gene predicted gene, 26564
Tssr97272 10 34233559 to 34233573 14 - TSS region transcription start site region 97272
Tssr97273 10 34233593 to 34233596 3 - TSS region transcription start site region 97273
Gm47485 10 34242813 to 34245589 2776 - unclassified gene predicted gene, 47485
Cpgi1434 10 34281894 to 34282927 1033 CpG island CpG island 1434
Tssr92923 10 34282179 to 34282193 14 + TSS region transcription start site region 92923
Tspyl1 10 34282190 to 34284885 2695 + protein coding gene testis-specific protein, Y-encoded-like 1
Tssr92924 10 34282199 to 34282278 79 + TSS region transcription start site region 92924
Tssr92925 10 34283495 to 34283510 15 + TSS region transcription start site region 92925
Tssr92926 10 34283621 to 34283644 23 + TSS region transcription start site region 92926
Tssr92927 10 34283873 to 34283877 4 + TSS region transcription start site region 92927
Tssr92928 10 34284905 to 34284911 6 + TSS region transcription start site region 92928
Gm47508 10 34293558 to 34296573 3015 + unclassified gene predicted gene, 47508
Gm47512 10 34295912 to 34298907 2995 - antisense lncRNA gene predicted gene, 47512
Cpgi1435 10 34297327 to 34298150 823 CpG island CpG island 1435
Tssr92929 10 34297432 to 34297513 81 + TSS region transcription start site region 92929
Tspyl4 10 34297442 to 34301320 3878 + protein coding gene TSPY-like 4
Tssr92930 10 34297562 to 34297577 15 + TSS region transcription start site region 92930
Tssr92931 10 34299064 to 34299068 4 + TSS region transcription start site region 92931
Tssr92932 10 34300841 to 34300858 17 + TSS region transcription start site region 92932
Nt5dc1 10 34303609 to 34418589 114980 - protein coding gene 5'-nucleotidase domain containing 1
Tssr97274 10 34388810 to 34388814 4 - TSS region transcription start site region 97274
Tssr92933 10 34389974 to 34389990 16 + TSS region transcription start site region 92933
Col10a1 10 34389981 to 34397085 7104 + protein coding gene collagen, type X, alpha 1
Cpgi1436 10 34418192 to 34418771 579 CpG island CpG island 1436
Tssr97275 10 34418465 to 34418567 102 - TSS region transcription start site region 97275
Tssr92934 10 34456487 to 34456488 1 + TSS region transcription start site region 92934
Frk 10 34483400 to 34611232 127832 + protein coding gene fyn-related kinase
Tssr92935 10 34483415 to 34483445 30 + TSS region transcription start site region 92935
Tssr92936 10 34483450 to 34483479 29 + TSS region transcription start site region 92936
Tssr92937 10 34483517 to 34483533 16 + TSS region transcription start site region 92937
Tssr92938 10 34483546 to 34483599 53 + TSS region transcription start site region 92938
Tssr92939 10 34483630 to 34483644 14 + TSS region transcription start site region 92939
Tssr92940 10 34484846 to 34484850 4 + TSS region transcription start site region 92940
Gm19162 10 34646912 to 34647634 722 - pseudogene predicted gene, 19162
Tssr3175 10 34673597 to 34673603 6 + TSS region transcription start site region 3175
Tssr97276 10 34713524 to 34713526 2 - TSS region transcription start site region 97276
Tssr92941 10 34787754 to 34787757 3 + TSS region transcription start site region 92941
Gm18252 10 34881457 to 34882160 703 + pseudogene predicted gene, 18252
Tssr97277 10 34882406 to 34882410 4 - TSS region transcription start site region 97277
Tssr92942 10 34898222 to 34898229 7 + TSS region transcription start site region 92942
Gm8834 10 34898256 to 34898820 564 + pseudogene predicted gene 8834
Tssr92943 10 34898697 to 34898710 13 + TSS region transcription start site region 92943
Tssr92944 10 34898777 to 34898784 7 + TSS region transcription start site region 92944
Tssr92945 10 35102619 to 35102620 1 + TSS region transcription start site region 92945
Gm26341 10 35112198 to 35112331 133 + snoRNA gene predicted gene, 26341
Gm47044 10 35142313 to 35142578 265 + pseudogene predicted gene, 47044
Gm18729 10 35242123 to 35242743 620 - pseudogene predicted gene, 18729
1700054O05Rik 10 35478827 to 35485396 6569 - lincRNA gene RIKEN cDNA 1700054O05 gene
Tssr97278 10 35485353 to 35485363 10 - TSS region transcription start site region 97278
Amd2 10 35708691 to 35711891 3200 - protein coding gene S-adenosylmethionine decarboxylase 2