Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:33699489-34199502

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D10Mit52 10 33707010 to 33707170 160 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 52
Gm47929 10 33714892 to 33715387 495 + pseudogene predicted gene, 47929
Sult3a2 10 33766424 to 33786704 20280 - protein coding gene sulfotransferase family 3A, member 2
Tssr97230 10 33786715 to 33786737 22 - TSS region transcription start site region 97230
Gm10327 10 33808497 to 33809498 1001 - pseudogene predicted pseudogene 10327
Tssr97231 10 33809571 to 33809573 2 - TSS region transcription start site region 97231
Tssr92920 10 33851000 to 33851004 4 + TSS region transcription start site region 92920
Tssr92921 10 33857710 to 33857713 3 + TSS region transcription start site region 92921
Sult3a1 10 33857721 to 33879532 21811 + protein coding gene sulfotransferase family 3A, member 1
Gm47935 10 33872634 to 33873018 384 - pseudogene predicted gene, 47935
Gm47940 10 33894093 to 33894256 163 - pseudogene predicted gene, 47940
Tssr92922 10 33905015 to 33905047 32 + TSS region transcription start site region 92922
Rsph4a 10 33905111 to 33916021 10910 + protein coding gene radial spoke head 4 homolog A (Chlamydomonas)
Zup1 10 33919142 to 33951269 32127 - protein coding gene zinc finger containing ubiquitin peptidase 1
Tssr97232 10 33924662 to 33924677 15 - TSS region transcription start site region 97232
Tssr97233 10 33927027 to 33927041 14 - TSS region transcription start site region 97233
Tssr97234 10 33933068 to 33933088 20 - TSS region transcription start site region 97234
Tssr97235 10 33933131 to 33933148 17 - TSS region transcription start site region 97235
Tssr97236 10 33933159 to 33933170 11 - TSS region transcription start site region 97236
Tssr97237 10 33933177 to 33933189 12 - TSS region transcription start site region 97237
Tssr97238 10 33933201 to 33933222 21 - TSS region transcription start site region 97238
Tssr97239 10 33933394 to 33933406 12 - TSS region transcription start site region 97239
Tssr97240 10 33936627 to 33936651 24 - TSS region transcription start site region 97240
Tssr97241 10 33937613 to 33937655 42 - TSS region transcription start site region 97241
Tssr97242 10 33939883 to 33939899 16 - TSS region transcription start site region 97242
Tssr97243 10 33947808 to 33947813 5 - TSS region transcription start site region 97243
Tssr97244 10 33949489 to 33949502 13 - TSS region transcription start site region 97244
Cpgi1429 10 33950835 to 33951333 498 CpG island CpG island 1429
Tssr97245 10 33951190 to 33951263 73 - TSS region transcription start site region 97245
Gm48018 10 33969983 to 33976689 6706 + pseudogene predicted gene, 48018
Gm7940 10 33972801 to 33973569 768 - pseudogene predicted gene 7940
Gm48034 10 33980497 to 33980840 343 - pseudogene predicted gene, 48034
A830082N09Rik 10 33987216 to 33995055 7839 - lncRNA gene RIKEN cDNA A830082N09 gene
Rwdd1 10 33996555 to 34019616 23061 - protein coding gene RWD domain containing 1
Gm48045 10 34018815 to 34020762 1947 + antisense lncRNA gene predicted gene, 48045
Cpgi1430 10 34019007 to 34020105 1098 CpG island CpG island 1430
Tssr3174 10 34019390 to 34019401 11 - TSS region transcription start site region 3174
Tssr97246 10 34019469 to 34019478 9 - TSS region transcription start site region 97246
Tssr97247 10 34019497 to 34019559 62 - TSS region transcription start site region 97247
Tssr97248 10 34019561 to 34019626 65 - TSS region transcription start site region 97248
Tssr97249 10 34019628 to 34019638 10 - TSS region transcription start site region 97249
Cpgi1431 10 34033922 to 34034259 337 CpG island CpG island 1431
Trappc3l 10 34037597 to 34109815 72218 + protein coding gene trafficking protein particle complex 3 like
Calhm4 10 34038784 to 34044310 5526 - protein coding gene calcium homeostasis modulator family member 4
Tssr97250 10 34044278 to 34044283 5 - TSS region transcription start site region 97250
Tssr97251 10 34044294 to 34044299 5 - TSS region transcription start site region 97251
Tssr97252 10 34044302 to 34044317 15 - TSS region transcription start site region 97252
D10Mit192 10 34066356 to 34066477 121 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 192
Calhm5 10 34091352 to 34096519 5167 - protein coding gene calcium homeostasis modulator family member 5
Tssr97253 10 34096375 to 34096389 14 - TSS region transcription start site region 97253
Tssr97254 10 34096464 to 34096467 3 - TSS region transcription start site region 97254
Tssr97255 10 34096480 to 34096497 17 - TSS region transcription start site region 97255
Tssr97256 10 34096507 to 34096554 47 - TSS region transcription start site region 97256
Calhm6 10 34126067 to 34127972 1905 - protein coding gene calcium homeostasis modulator family member 6
Cpgi1432 10 34127324 to 34127994 670 CpG island CpG island 1432
Tssr97257 10 34127919 to 34127930 11 - TSS region transcription start site region 97257
Tssr97258 10 34127955 to 34127980 25 - TSS region transcription start site region 97258
Tssr97259 10 34127997 to 34128014 17 - TSS region transcription start site region 97259
Dse 10 34151393 to 34207715 56322 - protein coding gene dermatan sulfate epimerase
Tssr97260 10 34151912 to 34151916 4 - TSS region transcription start site region 97260
D10Mit252 10 34160550 to 34160821 271 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 252
Gm47445 10 34178235 to 34179928 1693 - unclassified gene predicted gene, 47445
Tssr97261 10 34178576 to 34178581 5 - TSS region transcription start site region 97261
Tssr97262 10 34186485 to 34186496 11 - TSS region transcription start site region 97262
Tssr97263 10 34197763 to 34197768 5 - TSS region transcription start site region 97263